Pairwise Alignments

Query, 485 a.a., ammonium transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 441 a.a., ammonium transporter from Pseudomonas fluorescens SBW25-INTG

 Score =  221 bits (562), Expect = 5e-62
 Identities = 152/429 (35%), Positives = 206/429 (48%), Gaps = 45/429 (10%)

Query: 79  NTVWMLLAAMLVFFM-QPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFIGFGLMF 137
           +T WM+ AA+LV FM  PG AL   G  R KN  ++  + F       +L+   G+ ++ 
Sbjct: 35  STAWMVTAAVLVLFMCLPGLALFYGGLVRAKNMLSLFTQCFGIAGLVGVLWVIYGYSMVV 94

Query: 138 GAGGLI-----------GMPHFFDLSF----LDSDLPREGFLVFQTVFCATAATIVSGAM 182
              G++           G+   F        L  D+P   F+ FQ  F      +++GA 
Sbjct: 95  DTTGMVEGQVTFNSFVGGLSRAFLAGMTPESLVGDIPEGVFVTFQMTFAIITPALIAGAF 154

Query: 183 AERTKFSMYLVYTIFISVLIYPISGHWTWGGGWLMNGEEGSFMMNLFGTTFHDFAGSTIV 242
           AER KFS  L++      L+Y    H  WGG        G+ M N +G    DFAG T V
Sbjct: 155 AERMKFSAALLFMAIWFTLVYAPVAHMVWGGS-------GALMHN-WGVL--DFAGGTAV 204

Query: 243 HSVGGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTVAALGVFILWFGWFGFNPGSQLA 302
           H   G  AL    ILG R G      ++  +P HNL++   G  +LW GWFGFN GS   
Sbjct: 205 HINAGVAALAACLILGKRKGY-----QNTPMPAHNLSLTMAGAAMLWVGWFGFNIGSGGG 259

Query: 303 ASTEADAMAISHVFLTTNLAACAGGFFALAMSWMKYGKPSLSLTLNGVLAGLVGITAGCD 362
            S  +       V L T L ACAG    +   W K GKPS     +G LAGLVGIT  C 
Sbjct: 260 LSGTSGI-----VMLNTQLGACAGILGWMFTEWFKVGKPSALGLASGALAGLVGITPACA 314

Query: 363 AVAPSGAVLIGAICGVVMIFAVDFIDKVLKIDDPVGASSVHGVCGFLGTVLTGLFSTS-- 420
            V   GA+ IG +CGV    +V  + +    DD +    +HG+ G +G VLTG+F     
Sbjct: 315 YVGVGGALAIGLLCGVFCYLSVTVLKRRFGYDDSLDVFGLHGIGGMIGAVLTGVFCVPSM 374

Query: 421 ----EGLFYGHGAGFLGAQLFGAVVVGVWAAGMGFIIFKVLDKIHGLRVPARVEEEGLDI 476
               EG+  G   G + AQL G ++  V+   + +II KV++ + GLR    VEE GLD+
Sbjct: 375 GGLVEGVTMG---GQVVAQLKGVLLTTVYCFVISWIILKVVNALVGLRAHESVEEMGLDL 431

Query: 477 YEHGESAYN 485
            EH E AYN
Sbjct: 432 AEHNERAYN 440