Pairwise Alignments

Query, 619 a.a., putative Na+/sulphate transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 575 a.a., TrkA domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  211 bits (537), Expect = 7e-59
 Identities = 166/623 (26%), Positives = 306/623 (49%), Gaps = 60/623 (9%)

Query: 3   ITIIILVLSAIFFVNGKIRSDLVALCALVALLIFQILTPDEALSGFSNSVVIMMIGLFVV 62
           +TI I + + +  V  + R  LV    L+ L+ F ++T ++ LS  SN  ++ ++ L + 
Sbjct: 7   LTIAIFLATIVGLVRFQNRPALVFGVTLLVLVAFNLVTKEQLLSSMSNPGLVTLVLLILC 66

Query: 63  GGAIFQTGLAKMISSRILKLAGNSE-IRLFFLVMLVTSAIGAFVSNTGTVALMLPIVVSL 121
             A+ +T L ++I+++++     +  +RL+ +    T+   A ++NT  VA +L  +   
Sbjct: 67  SFALEKTRLLRVIAAKVIVSGYRTTWLRLYGM----TALSSALLNNTAVVATLLSPI--- 119

Query: 122 AMSAKMNP----SRLLMPLAFASSMGGMMTLIGTPPNLVIQNTLTSAGFEPLSFFTFLPV 177
               + NP    S+LL+PL++A+ +GG +TL+GT  NL++ + +  A  + LSFF+F  +
Sbjct: 120 ----RNNPHHVASKLLLPLSYAAILGGTLTLVGTSTNLIVNSMVIDASNQSLSFFSFTAI 175

Query: 178 GLVSVAVGTLVLMPLSKWFLSKKGQKDDNSRSGKSLKQLVNEYGLSSNLF-RMQVIKDSR 236
           G + V    LVL   S+W                 L  + ++   S   F   +V+  S 
Sbjct: 176 GALLVLGCGLVLRIASRW-----------------LPDIAHQETCSKGYFIDAKVVAGSE 218

Query: 237 LLGKTILDLDIRRKYGLNIMEVRRGDASQHRFLKTITQKLAEPDTMLEAEDILYVTGEFD 296
           L+G+++ D  +R    L ++EV R      R +  +T     P  +L+ +D L  +G+  
Sbjct: 219 LIGRSVEDNGLRHLESLFLVEVVRNG----RLISPVT-----PTEVLQQDDRLIFSGDIA 269

Query: 297 KVQQFAEDYLLDILDDHATEETKSTTNSLDFYDIGIAEIVLMPASNLVNQTIKESGFRDK 356
           KV Q ++   L++  +          N L   D  + E+V+   S LV +T+K++GFR  
Sbjct: 270 KVMQLSQFSGLEMFAEK---------NGL--LDSNLTEVVVKQESVLVGKTMKKAGFRAL 318

Query: 357 FNVNVLGIRRKKEYLLQDLGNERIHSGDVLLVQGTWSNIARLSKEDSDWVVLGQPLAEAA 416
           F+   + IRR  E +   LG  +I +GD L++      + R +   +  V+ G    E  
Sbjct: 319 FDAAAVAIRRDGEEISGKLGEVQIKAGDFLVLAVGKDFLTRHNISKNFIVISG---VEPE 375

Query: 417 KVTLDYKAPVAAAIMVLMVAMMVFDFIPVAPVTAVMIAGILMVLTGCFRNVEAAYKTINW 476
                 KA ++    VL + +     + +     +++   +++ T C  NV    +    
Sbjct: 376 TRNNGKKAWISIGGFVLTLVLAATGVVEMLQGMLLLLG--VLIFTQCL-NVNEVVRRFPV 432

Query: 477 ESIVLIAAMLPMSLALEKTGASEYISNTLVSGLGSYGPIALMAGIYFTTSLMTMFISNTA 536
           +  +++A+ + +S AL  +G +E +++ +         +  +  +Y  T LMT  I+N A
Sbjct: 433 DIWLVVASAILLSHALVNSGVAELVASWVEGTAEKEHLMLALLLVYLATWLMTELITNNA 492

Query: 537 TAVLLAPIALQSAMQIGVSPVPFLFAVTVGASMCFASPFSTPPNALVMPAGQYTFMDYIK 596
            A L+ PIA   A+  GV  +PF+  V   AS  F SP+    N +V  AG+Y  MD++K
Sbjct: 493 AAALMFPIAYSIALGFGVDFLPFVMTVAFAASGSFISPYGYQTNLMVYNAGRYRLMDFVK 552

Query: 597 VGLPLQIIMGIVMILVLPLIFPF 619
           VG+P+ +  G +++L +PL FPF
Sbjct: 553 VGVPVSLTYGAIVLLTVPLFFPF 575