Pairwise Alignments

Query, 619 a.a., putative Na+/sulphate transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 574 a.a., TrkA domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  234 bits (596), Expect = 1e-65
 Identities = 174/621 (28%), Positives = 313/621 (50%), Gaps = 55/621 (8%)

Query: 2   LITIIILVLSAIFFVNGKIRSDLVALCALVALLIFQILTPDEALSGFSNSVVIMMIGLFV 61
           L+ I++  L A   + G+I   ++ L A +   +  +++ D AL+ F+N+ ++ ++ L +
Sbjct: 6   LLAIVLFGLVA-GLIAGRINPAVLFLFAFLLCYLLGMVSLDTALTSFTNTGLVTLVLLVL 64

Query: 62  VGGAIFQTGLAKMISSRILKLAGNSEIRLFFLVM-LVTSAIGAFVSNTGTVALMLPIVVS 120
              A+ +T L   +S  I    GN+ + +    +   T+ + +F +NT  VA ++ +V  
Sbjct: 65  AATALEKTSLLGKLSQVI----GNNSLAVTMAKLGFSTALLSSFTNNTAVVASLIGVVRR 120

Query: 121 LAMSAKMNPSRLLMPLAFASSMGGMMTLIGTPPNLVIQNTLTSAGFEPLSFFTFLPVGLV 180
               A   P++LL+PL +A+ +GG +TLIGT  NL++ + + +AG   L FF F PV ++
Sbjct: 121 NQAHA---PAKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVENAGLPALGFFEFTPVAML 177

Query: 181 SVAVGTLVLMPLSKWFLSKKGQKDDNSRSGKSLKQLVNEYGLSSNLFRMQVIKDSRLLGK 240
            V +G ++L+ L+    +   +++D++   ++L  L+  +          V K S L+G+
Sbjct: 178 IVLLGIVLLIVLAN---TLPDRREDSTE--ETLPYLLEAH----------VAKGSSLVGR 222

Query: 241 TILDLDIRRKYGLNIMEVRRGDASQHRFLKTITQKLAEPDTMLEAEDILYVTGEFDKVQQ 300
           +++D  +R    L ++E+ R           I      P  +L+A+D+L  +G  + V+ 
Sbjct: 223 SVVDNKLRALKKLYLVELERSG---------ICICPVPPQLVLQADDVLRFSGAVESVEL 273

Query: 301 FAEDYLLDILDDHATEETKSTTNSLDFYDIGIAEIVLMPASNLVNQTIKESGFRDKFNVN 360
             +    D LD     + K            + E VL P+S+LV  T+KES FR++F+  
Sbjct: 274 LHQ---FDGLDWFGKHQAKGQN---------LVEAVLAPSSSLVGSTLKESRFREQFDAA 321

Query: 361 VLGIRRKKEYLLQDLGNERIHSGDVLLVQ--GTWSNIARLSKEDSDWVVLGQPLAEAAKV 418
           V+ IRR    L   LG+  +  GDVLL+     +S  A+LS E +   V G  L     V
Sbjct: 322 VMAIRRGHHPLKGGLGDIVLQPGDVLLLTPGDGFSTNAKLSTEFA--AVSGLDL----NV 375

Query: 419 TLDYKAPVAAAIMVLMVAMMVFDFIPVAPVTAVMIAGILMVLTGCFRNVEAAYKTINWES 478
            LD +   +  ++   V  +V     V P+   ++  +L         +    +    E 
Sbjct: 376 RLDSRR--SRFVLSSFVITIVLSLTGVLPLAKGLVLLLLSYFAIGAVTLSELKRRFPLEL 433

Query: 479 IVLIAAMLPMSLALEKTGASEYISNTLVSGLGSYGPIALMAGIYFTTSLMTMFISNTATA 538
           +V++ + L ++  +  TG ++ ++  L+  +  YG      G+Y  T L+T  ++N A A
Sbjct: 434 VVIVGSALGLANLMMSTGLADGLAQGLLGTINGYGVFGAFVGVYLVTLLLTELVTNNAAA 493

Query: 539 VLLAPIALQSAMQIGVSPVPFLFAVTVGASMCFASPFSTPPNALVMPAGQYTFMDYIKVG 598
            L  PIA   A+  GV P PF+ AV  GAS  F SP+    N +V  AG Y F D++++G
Sbjct: 494 ALAFPIAYAVALNYGVDPRPFIMAVVFGASASFISPYGYQTNLMVFNAGNYRFSDFLRLG 553

Query: 599 LPLQIIMGIVMILVLPLIFPF 619
           LPL ++  +++I ++P+IFPF
Sbjct: 554 LPLSVLYSLIVIFMVPVIFPF 574