Pairwise Alignments

Query, 394 a.a., tryptophan synthase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 420 a.a., tryptophan synthase subunit beta from Synechococcus elongatus PCC 7942

 Score =  412 bits (1058), Expect = e-119
 Identities = 208/389 (53%), Positives = 274/389 (70%), Gaps = 9/389 (2%)

Query: 7   DQDGYYGEFGGAYVPEILHKCVEELKNTYLGVLESEDFKKEFDQLLRDYVGRPSPLYLAR 66
           D  G +G FGG YVPE L   + EL+  +       +F+ EF+ LLRDYVGRP+PLY A 
Sbjct: 26  DPLGRFGRFGGQYVPETLMPALAELEQAFARYSRDPEFQAEFEGLLRDYVGRPNPLYFAE 85

Query: 67  RLSEKY------GCKMYLKREDLNHTGAHKINNTIGQILLARRMGKKRIIAETGAGQHGV 120
           RL+E Y      G  +YLKREDLNHTGAHKINN +GQ L+A+RMGKKRIIAETGAGQHGV
Sbjct: 86  RLTEYYRRPDGQGPNIYLKREDLNHTGAHKINNALGQALMAKRMGKKRIIAETGAGQHGV 145

Query: 121 ATATVCALMDMECIVYMGKTDVERQHINVEKMKMLGATVIPVTSGNMTLKDATNEAIRDW 180
           ATATVCA   +EC++YMG  D+ERQ +NV +M+++GA V  V +G+ TLKDAT+EAIRDW
Sbjct: 146 ATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRGVAAGSGTLKDATSEAIRDW 205

Query: 181 CCHPADTYYIIGSTVGPHPYPDMVARLQSVISEEIKKQLMEKEGRDHPDYLIACVGGGSN 240
             +   T+YI+GS  GPHPYP +V    S+I  E+++Q     G   PD L+ACVGGGSN
Sbjct: 206 VTNVETTHYILGSVAGPHPYPMIVREFHSMIGREVRQQAQTLWG-GLPDILLACVGGGSN 264

Query: 241 AAGTIYHYINDGRVGIILAEAGGKGIETGMTAATIQLGKMGIIHGARTYVIQNEDGQIEE 300
           A G    ++N+  V +I  EA G+G++T   AAT+  G++G++HGA +Y++Q++DGQ+ E
Sbjct: 265 AMGLFNEFVNEPSVRLIGVEAAGRGVDTPEHAATLTKGRVGVLHGAMSYLLQDDDGQVIE 324

Query: 301 PYSISAGLDYPGIGPIHANLAAQRRATVLAVNDDEAIEAAYELTKLEGIIPALESAHALG 360
            +SISAGLDYPG+GP H+ L    RA   +V DDEA+EA   +++LEGIIPALE+AHA  
Sbjct: 325 AHSISAGLDYPGVGPEHSYLMDAGRAEYYSVTDDEALEAFQRISRLEGIIPALETAHAFA 384

Query: 361 ALKKL--KFKPEDVVVLTVSGRGDKDIET 387
            L+KL         +V+  SGRGDKD++T
Sbjct: 385 HLEKLCPTLSGNPNLVINCSGRGDKDVQT 413