Pairwise Alignments

Query, 394 a.a., tryptophan synthase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 403 a.a., tryptophan synthase, beta subunit from Sphingomonas koreensis DSMZ 15582

 Score =  422 bits (1086), Expect = e-123
 Identities = 220/384 (57%), Positives = 275/384 (71%), Gaps = 4/384 (1%)

Query: 7   DQDGYYGEFGGAYVPEILHKCVEELKNTYLGVLESEDFKKEFDQLLRDYVGRPSPLYLAR 66
           D+ G++G+FGG YV E L   + +L+  Y        F+ EFD L++ YVGRPSPLY A 
Sbjct: 12  DERGHFGQFGGRYVAETLMPLILDLEREYRAAKADPAFQAEFDGLMKHYVGRPSPLYFAE 71

Query: 67  RLSEKYG-CKMYLKREDLNHTGAHKINNTIGQILLARRMGKKRIIAETGAGQHGVATATV 125
           RL+  YG  K+Y KRE+LNHTGAHKINN IGQILLA RMGKKRIIAETGAGQHGVATATV
Sbjct: 72  RLTRHYGGAKIYFKREELNHTGAHKINNCIGQILLAIRMGKKRIIAETGAGQHGVATATV 131

Query: 126 CALMDMECIVYMGKTDVERQHINVEKMKMLGATVIPVTSGNMTLKDATNEAIRDWCCHPA 185
           CA   + C ++MG  D+ERQ  NV +MK+LGA V PVTSG+ +LKDA NEA+RDW     
Sbjct: 132 CARFGLPCTIFMGAKDIERQQPNVFRMKLLGAEVRPVTSGSQSLKDAMNEALRDWVATVH 191

Query: 186 DTYYIIGSTVGPHPYPDMVARLQSVISEEIKKQLMEKEGRDHPDYLIACVGGGSNAAGTI 245
           DT+YIIG+  GPHPYP++V   QSVI  E + Q++E EGR  PD LIA VGGGSNA G  
Sbjct: 192 DTFYIIGTAAGPHPYPELVRDFQSVIGTESRAQMLEAEGR-LPDLLIAAVGGGSNAIGLF 250

Query: 246 YHYINDGRVGIILAEAGGKGIETGMTAATIQLGKMGIIHGARTYVIQNEDGQIEEPYSIS 305
           + +++D  V ++  EA GKGI+T   AA++  G  GI+HG +TY++Q+EDGQI E +SIS
Sbjct: 251 HPFLDDNDVAMVGVEAAGKGIDTSEHAASLTGGAPGILHGNKTYLLQDEDGQITEAHSIS 310

Query: 306 AGLDYPGIGPIHANLAAQRRATVLAVNDDEAIEAAYELTKLEGIIPALESAHALGALK-K 364
           AGLDYPGIGP H+ L    R   L V D +A++A     KLEGIIPALES+HAL AL+ K
Sbjct: 311 AGLDYPGIGPEHSWLHESGRVEYLPVTDTQALDAFQLCCKLEGIIPALESSHALAALEHK 370

Query: 365 LKFKPED-VVVLTVSGRGDKDIET 387
            +  P D ++++ VSGRGDKDI T
Sbjct: 371 ARELPSDKIILVNVSGRGDKDIYT 394