Pairwise Alignments

Query, 775 a.a., TonB-dependent outer membrane receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 621 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 84.3 bits (207), Expect = 2e-20
 Identities = 113/508 (22%), Positives = 203/508 (39%), Gaps = 77/508 (15%)

Query: 118 EDAVALDGVVVSANRNETTRRLAPTLVNVVDMKMFETTNSTTLAQGLSFQPGVRVESNCQ 177
           +D++ L  VV+SA +N+  +     +V+++  ++ E +N  +L   LS Q G+ +     
Sbjct: 28  QDSLQLKDVVISATKNDQKQSQTGKVVSIISREVLERSNGKSLPDLLSEQAGIIISGGNS 87

Query: 178 NCGFQQ-VRINGLDGPYTQILLDS--RPIFSALSGVYGIEQIPASMIERVEVMRGGGSAL 234
           + G  + +   G    YT +L+D   +   +++SG + +       I+ +E++RGG S +
Sbjct: 88  SQGKDKSIFFRGSGSGYTLVLIDGIVQNDPASISGTFDLRLFSIDQIDHIEILRGGQSTI 147

Query: 235 FGSSAIAGTINIITKEPIRNSGMLSHTITGIGDGDAFDNNTALNASLVTDDQRAGLYIFG 294
           +GS A+AG INI+TK+     G   +TI G+    +F+          T     G+  F 
Sbjct: 148 YGSDAVAGVINIVTKK----GGPKGNTIYGVASAGSFETYKG------TIGLNGGVEGFS 197

Query: 295 QNRHRSAYDHDGDGYSEIP------------KIHGQTIGFRSFLKTTTYSKLTFEYHHME 342
            N + +    DG   +  P            K  G    F   L           Y + +
Sbjct: 198 YNINYTHLKTDGISEAVAPAGSAAIFDKDGFKTDGLNANFGIKLDKNFSVNPFLRYFYGD 257

Query: 343 EFRRGGDLLNRPPHEANVAEQ------TEHSINGGGLKYDYFSPNEKHRFNVFASAQHIN 396
                G   +  P   ++ +Q      +E+  N G +  +Y   +  +  N         
Sbjct: 258 YKIDEGAFADGLPTNNSILKQFSAGFNSEYKFNTGKITLNYSHESNSNNVN--------- 308

Query: 397 RDSYYGGGQDLNAYG--NTTDL--NWMAGSQYVYSFGKCIFMPSDLTAGIEFNQDKLEDN 452
             SY G       +G  N  DL  N   G++             DL  GI+  + KL  +
Sbjct: 309 -SSYAGFESKFLNFGKLNVVDLFYNQKLGNKL------------DLLVGIDNRKMKLITD 355

Query: 453 MWGYHRTVDQKVNIGSAFLQNEWKNDHWGFLLGGRLDKHNLI-DHIIFSPRANLRFNPTQ 511
               + T +     GS FL +      +   +GGR +KH+   ++  +S   ++  N  +
Sbjct: 356 --SKNPTTNIFAAYGSLFLHD---LSIFNLEVGGRYNKHDQYGENYTYSVTPSI--NIIK 408

Query: 512 NINLRLSYSSGFRAPQAFDEDLHVENVGGNVAMVELAKDLKEERSQSLSASADIYHRFGA 571
            + L  + S+ F+ P     ++     G N+       DLK E+SQ+  A  ++     A
Sbjct: 409 EVKLFGTVSTAFKIPTL---NMLFGQYGANL-------DLKPEKSQNYEAGVNLNMADEA 458

Query: 572 FQINFLVEGFYTKLSDVFALTDGEVKDG 599
           F +   V  F   L+D    T G +  G
Sbjct: 459 FTLR--VTSFKRDLTDAIVYTTGYINQG 484