Pairwise Alignments

Query, 775 a.a., TonB-dependent outer membrane receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 783 a.a., ferric aerobactin receptor from Pedobacter sp. GW460-11-11-14-LB5

 Score = 95.5 bits (236), Expect = 1e-23
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 71/420 (16%)

Query: 41  IVGHILDKNTKEHLPYITVALKGTTIGTVTDATGHYFLKNLPEGNFVLEVSSVGYKTVRR 100
           I G ++D +    +P+  + ++   + + +D +G + L  +P GN ++ VS  GY  V +
Sbjct: 30  ISGKVVD-SLGNSIPFANIQVRKQNLKSTSDKSGAFKLTAVPAGNQLIRVSITGYDQVEQ 88

Query: 101 NVTLKKGRTLEEDFEIEEDAVALDGVVVSANRNETTRRLAPTLVNVVDMKMFET--TNST 158
            V++    T +  F ++E    L+ V+VSA+R   +    P+ V V+  K   T  T S 
Sbjct: 89  GVSVTANDTTQVTFVLKEQHAELNDVIVSASRRPESLSQTPSSVTVLTAKELNTQSTISP 148

Query: 159 TLAQGLSFQ-PGVRVESNCQNCGFQQVRINGLDGPYTQILLDSRPIFSAL-SGVYGIEQI 216
            LA  LS+  PG+   +N      Q +R     G    +L+D  P  + L +G   I  I
Sbjct: 149 NLANILSYSVPGLGFSTNQTGNSGQTLR-----GRNVLVLIDGIPQSTPLRAGGRDIRSI 203

Query: 217 PASMIERVEVMRGGGSALFGSSAIAGTINIITKEPIRNSGMLSHTITGIGDGDAFDNNTA 276
             S+IERVEV++ G +A++G+ A  G IN ITK+  +      ++  GI  G+   ++T 
Sbjct: 204 DPSVIERVEVIK-GATAIYGNGAEGGLINYITKKADKGKSFGGYSQAGI-TGNLKGDSTV 261

Query: 277 LNASLVTDDQRAGLYIFGQNRHRSAYDHDGDGYSEIPKIHGQTIGFRSFLKTTTYSKLTF 336
                                          GY    +++G+T G   +L +  + K   
Sbjct: 262 -------------------------------GYRFSQQLYGKT-GKFDYLVSGMFEKTGV 289

Query: 337 EYHHMEEFRRGGDLLNRPPHEANVAEQTEHSINGGGLKYDY-FSPNEKHR--FNVFASAQ 393
                  FR    L+  P  E  + E   ++   G +K  Y F+P ++ +  +N F+S Q
Sbjct: 290 -------FRDAEGLVISP--EYGLGETKSYN---GFVKLGYNFTPKQRLQVMYNYFSSRQ 337

Query: 394 H---INRDSYYGGGQDLNAYGNT------TDLNWMAGSQYVYSFGKCIFMPSDLTAGIEF 444
           H   + +D  YG    +  YG        T  N  A  QY     + IF  +DLTA + +
Sbjct: 338 HSKYLTKDGVYGQSPAIGIYGTRLGEDEGTRFNHNANLQYT---NQQIFGKTDLTANVYY 394