Pairwise Alignments

Query, 368 a.a., lipopolysaccharide biosynthesis RfbU-related protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 415 a.a., glycosyltransferase from Sinorhizobium meliloti 1021

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)

Query: 181 GKWNRQRELSAGDKIKLVYAGSAGFGVKDRLDTIAKAIVKFP---NMQFDVIGMTEGQYV 237
           G+ +R+      D +++V  G A    K   D + KA+   P   N +F+ IG   G+  
Sbjct: 215 GEHSRRDGADPDDPVRIVSVGRAV--PKKGYDVLLKALSLLPADINWRFEHIGA--GELT 270

Query: 238 SGYGELPKDC---KNILFHGRLPHTETVKAVQDAD-FQFLIRDSNLKNNAGFPTKFVESI 293
            G   L         I +HG L   + +   + AD F    R +   +  G P   VE+ 
Sbjct: 271 GGLQALAAKLGIEDRIRWHGALDQKDVLGRYRGADIFALACRVAADGDRDGLPNVLVEAS 330

Query: 294 TCCTPVIATLTSNISDYLKDGKNGFVV 320
           +     I+T  S I + L+DGKNG VV
Sbjct: 331 SQRLACISTAVSGIPELLEDGKNGLVV 357