Pairwise Alignments

Query, 401 a.a., capsular polysaccharide biosynthesis protein Cps4K (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 348 a.a., dTDP-glucose 4,6-dehydratase from Sinorhizobium meliloti 1021

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 53/226 (23%), Positives = 84/226 (37%), Gaps = 31/226 (13%)

Query: 3   ILVTGAKGFVGRNLCAQL----------NNIKNGKARCYGDLKIEEVFEYDIDSTSEQLD 52
           ILVTG  GF+G +LC  L          +N   G  R    LK  + F        E +D
Sbjct: 31  ILVTGGAGFLGSHLCELLLGAGHEVICLDNFSTGLRRNIAPLKRFDTFRVIAHDVVEPID 90

Query: 53  AWCQKADFVFNLAGVNRPK----ENVEFMKGNFGFASTLLDTLKKHH------NTCPVML 102
               + D ++NLA    P     + ++  K     +  LLD   +        +T  +  
Sbjct: 91  L---EVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLAARRGARIFQASTSEIYG 147

Query: 103 SSSAQASLTGRFGN-------SEYGRSKKAGEDLFLQYGKDTGAKVLVYRFPNLYGKWCR 155
                  +   +GN       S Y   K+  E LF  + K  G ++ + R  N YG   R
Sbjct: 148 DPHVHPQVESYWGNVNPFGPRSCYDEGKRCAETLFFDFHKSHGVEIKIVRIFNTYGPRMR 207

Query: 156 PNYNSAVATFCNNIANDLPIQV-SDSSVVLELLYIDDLVDEMIHAL 200
           P+    V+ F         I +  D S      +++DL+D  +  +
Sbjct: 208 PDDGRVVSNFIVQALKGEDITIYGDGSQTRSFCFVEDLIDGFVRLM 253