Pairwise Alignments

Query, 513 a.a., putative endo-arabinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1121 a.a., beta-xylosidase-like protein (RefSeq) from Shewanella sp. ANA-3

 Score =  126 bits (317), Expect = 4e-33
 Identities = 127/506 (25%), Positives = 205/506 (40%), Gaps = 113/506 (22%)

Query: 61  VHDPSCRKLGDYYYMYSTDAIFGENRKEAREKGVPLGFIQMRRSKDLVHWEFLGWAFPEI 120
           VHDPS  K  D  Y      +FG +             + +  S DL++W  +  A    
Sbjct: 58  VHDPSIIKDTDGTYY-----VFGSH-------------LAVASSTDLMNWTQI--ASDGA 97

Query: 121 PEEAV------QWVQSHAGGQGATNIWAPYIIPYKD-KYRLYY----------CVSAFGR 163
            E ++      +  +  A   G    WAP +I   D KY  YY          CVS    
Sbjct: 98  AESSLFNTYESEIAEGTAWTGGFVGSWAPDVIKLADGKYHFYYDFCGGPDKIDCVSR--- 154

Query: 164 KTSYIGLAESTSPEGPWTQKGCIVKTDDSTAMN---------------AIDPSVIADENT 208
             SY+G+A S +  GP+  +G I+K+    A N               AIDP+V  D++ 
Sbjct: 155 --SYLGMATSDNILGPYVNQGLILKSGQEGAENPGANGQIYDGFVDPNAIDPAVFYDKDG 212

Query: 209 GKWWMHYGSFFGGLYCVELNPETGLALNEGDLGHLVARRANYRKDNLEAPEIIYHPELKQ 268
           G W M YGS+ GG++ ++L+P TG  L +   G  +    NY    +E   +IY PE + 
Sbjct: 213 GLW-MTYGSYSGGIWVMQLDPATGKPLPDQGYGTKIMG-GNYSA--IEGSYVIYSPESEY 268

Query: 269 YYLFTSYDPLMTT--YNVRVSRSDAAEGPFTDYFGKAVKDTT-------------NNFPI 313
           YY+FTS+        YN+R+SR+    GP+ D  G  +   T               F  
Sbjct: 269 YYMFTSFGGFAQKDGYNIRISRAKNPNGPYVDAAGLDMIGATAAGNIADYGVKLMGGFQF 328

Query: 314 LTAPYRFENHTGWAGTAHCAVFSDGE-GNYFMAHQGRLSPQNQLMVLHIRQLFFTPEGWP 372
           +  P    +  G+    H + F D + G YF+    R     +   + + +LF   +GW 
Sbjct: 329 VAHPGDVGHDHGYLSPGHNSAFYDAQTGKYFLVFHTRFPDTGEGHSVRVHELFLNSDGWL 388

Query: 373 VASPERYAGTASRQFSKE-DLVGEWEIIRVQEPAYERQLEAGQILWGEGELKEKEWNLST 431
           VASP+RYA         E D+ G+++ I      + + +              K  ++  
Sbjct: 389 VASPQRYAPINGANIVDEIDVTGDYQFIN-----HAKNINTA---------AHKSVHVKL 434

Query: 432 RVTLVKDGTCKGQMTDNEWNIVQMNGKWSFLTEKHLLMVDLNSEKIENLVIFAG---HDW 488
             T    GT  G +T          G +    +  + ++      ++NL  F G     W
Sbjct: 435 SRTWTNKGTVSGDVT----------GTYQQGDDNQITLM------LDNLGTFEGVLAWQW 478

Query: 489 ENETETIL--FTGLDSRGRSVWGKRI 512
           + E   ++  F+ + + G S+WG ++
Sbjct: 479 DPEQNKLMPTFSAISNDGASIWGVKL 504