Pairwise Alignments

Query, 517 a.a., putative ATPase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 303 a.a., ATPase (RefSeq) from Shewanella loihica PV-4

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 24/284 (8%)

Query: 7   IQLLLSEMNRGVYEKEAEIGLSLLAALAGESILLLGPPGVAKSMVARRLKRAFVDARAFE 66
           I  +L+++ R +  K  +I L+L   LA   +L+   PG+ K+ +++ + ++        
Sbjct: 6   ITAILNQLQRVLLGKPHQIKLALTCILAKGHLLIEDLPGMGKTSLSQGMAQSL----GLS 61

Query: 67  YLMSRFST---PDEIFGPVSISRLKESDKYERAVDGYLPTADVVFLDEIWKAGPAIQNTL 123
           +   +F++   P +I G VSI   ++S         +     ++  DEI +A P  Q+ L
Sbjct: 62  HQRIQFTSDMLPADILG-VSIFDKEQSQFVFHPGPIF---KQMILADEINRASPKTQSAL 117

Query: 124 LTVINEKLFRNGDTELKLPLKLLVAASNELPTQGEGL----EALWDRFLIRIISTCVKQE 179
           L  + E+          LP    V A+   P++  G     E+  DRF++R IS     E
Sbjct: 118 LEAMAEQQITVDGVTHALPSPFFVIATQN-PSEQSGTFPLPESQLDRFMMR-ISIGYPDE 175

Query: 180 EAFYQMLLDDDDEEEQEACRWQISDEEYAGWQKEIRQIKVSAEVLSCITEIRKNLEKVEI 239
            A   ML  +D   +Q+     +        Q ++ ++K S  +L+ I  + K       
Sbjct: 176 TAELAMLKGEDISPQQQHLPACVDPLTLIELQSQVTKVKASEALLNYILALVKG------ 229

Query: 240 QGSEVHRNVYVSDRRWKNIVKLLKASAFIHGRKEVCLTDLLPVY 283
              +++    +S R  K ++   KA AFI GR  +   D+  V+
Sbjct: 230 -SRQLNEGYGLSPRASKALLNAAKAWAFIQGRNYLVPDDVQAVF 272