Pairwise Alignments

Query, 517 a.a., putative ATPase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 509 a.a., ATPase (RefSeq) from Shewanella sp. ANA-3

 Score =  243 bits (621), Expect = 9e-69
 Identities = 170/484 (35%), Positives = 259/484 (53%), Gaps = 33/484 (6%)

Query: 4   KERIQLLLSEMNRGVYEKEAEIGLSLLAALAGESILLLGPPGVAKSMVARRLKRAFVDAR 63
           K++I  L++ MN G+ E++ +I L LLAALAGE +LL+GPPG AKS +A+RLK  FV+A 
Sbjct: 13  KDKISQLMAAMNVGLLERKEQIKLILLAALAGEHVLLVGPPGTAKSELAKRLKNIFVEAS 72

Query: 64  AFEYLMSRFSTPDEIFGPVSISRLKESDKYERAVDGYLPTADVVFLDEIWKAGPAIQNTL 123
            FE L++RFS P+E+FGP+SI R  E D+Y R   GYLP A V F+DEI+KA  AI N+L
Sbjct: 73  YFERLLTRFSVPEEVFGPLSI-RALEDDRYARLTSGYLPDASVAFIDEIFKANSAILNSL 131

Query: 124 LTVINEKLFRNGDTELKLPLKLLVAASNELPTQGEGLEALWDRFLIRIISTCVKQEEAFY 183
           LT++NE+ F NG+   K+PL  ++AASNELP +GE L AL+DRF++R  S      ++ +
Sbjct: 132 LTILNEREFDNGNRRYKVPLISVIAASNELP-EGEELSALYDRFMLR--SFVGPVSDSSF 188

Query: 184 QMLLDDDDEEEQEACRWQISDEEYAGWQKEIRQIKVSAEVLSCITEIRKNLEKVEIQGSE 243
             LL    E+ +     ++  E+ A  Q+   ++ +S+ VL+   E R  L +       
Sbjct: 189 SELLQLSAEKFEPELNIRLKLEDLADVQQLADKVTLSSSVLALCKEFRAYLNR------- 241

Query: 244 VHRNVYVSDRRWKNIVKLLKASAFIHGRKEVCLTDLLPVYHCLWNEPEECADIRQIVVRA 303
              N+YVSDRRW  ++KL+K SAF  G  +V   D   + HCLWN+PEE + ++++  +A
Sbjct: 242 --ENIYVSDRRWLKLIKLMKVSAFTSGLTQVSNYDAWVLPHCLWNKPEEFSGLQELYNQA 299

Query: 304 LFV--PYVKEIAAINLSLKSDLKVSRVREALEKARQKGDRRDDDLMIIDHFYYQIENHG- 360
           + +   +  E A+   SL +  +  R++    + +QK D +   L I D     +++ G 
Sbjct: 300 VAINGDFTDERAS---SLVATWE-GRLKADKSQQKQKVDNKSRPLFINDKGKQTLQSSGE 355

Query: 361 -----TGNTYIFIVDYKNLKEYSPK---DVPATGVMYADPLNPKRTIIRTFSDATKMKEQ 412
                     ++  DY N +  S +         +M      P    I    D  K +  
Sbjct: 356 VQKTNAKGEVLYWDDYDNKETTSSRGRYSSSLNAIMINQAFKPVMESISYSEDHIKGRVA 415

Query: 413 GAERVTLYRDEKNLYINGVRFPMRRLKRGEQQQLWLGNMTLTD--RDYETELETAHGRIE 470
           G E +      KN +IN +       K   +  LWL    L+      +  LE +H    
Sbjct: 416 GVEEI--LAKIKN-HINALSKQREDAKTVFESHLWLNPELLSKVIASLDNALEYSHKLSN 472

Query: 471 KLVK 474
           +LVK
Sbjct: 473 RLVK 476