Pairwise Alignments

Query, 457 a.a., outer membrane protein oprM precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 459 a.a., NodT family RND efflux system outer membrane lipoprotein from Klebsiella michiganensis M5al

 Score =  224 bits (571), Expect = 5e-63
 Identities = 144/456 (31%), Positives = 233/456 (51%), Gaps = 7/456 (1%)

Query: 3   LNKLYIAILLFAGILTSCKVGKSYVRPDLHLPDSLAQHQDTVSFGDQDWEEIYTDSTLRS 62
           +  L +A++L      S  V ++   P L +P +        S  +  W   + DSTL  
Sbjct: 2   IRPLALAVILALAGCQSADVQQA--APGLQIPAAWRADVGPSSPVEGVWWRNFHDSTLNL 59

Query: 63  LIDRALDHNKDMLIAAARIKEMAAQKRISTAALLPDIKGKVTAERELENHGGDAFKKSDT 122
            +D+AL +N D+L+A  R+ E  A+   + ++L P +   +T  R              T
Sbjct: 60  YVDQALRYNSDVLMARERVNEYQARAYAADSSLFPSLDAGLTGTRARSQSAATGLPVHST 119

Query: 123 -FEAQFLVSWELDLWGNLRWARSASIAEYLQSVEAQRALQMTIVAEVAQAYYELVALDTE 181
            ++     S+++D+WG  R A SA+ A       A  A  +T+ + VA  Y  L++LD +
Sbjct: 120 VYKGALTASYDVDIWGANRSASSAAQASLEAQKAAAAAANLTVASSVAVGYITLLSLDEQ 179

Query: 182 LDIVKQTLKAREEGVRLARIRFEGGLTSETSYRQAQVELARTATLVPDLERKISLKENDI 241
           L + +QTLK+RE+   LA+ +FE G TS     QA  EL  T   +P L  +I+ +EN +
Sbjct: 180 LRVTQQTLKSREDAFNLAKRQFETGYTSRLELMQADSELRSTRAQIPPLRHQIAQQENAL 239

Query: 242 AFLAGEYPNRIARSRLLQEFNFPETLPIGMPSTLLERRPDIRQAEQKLIAANAKVGVAYT 301
           + L G  P  + R+   Q    P +LP  +PSTLL RRPDI QA+++L+AA+A +  +  
Sbjct: 240 SLLLGANPGAVKRNAFAQ--LSPLSLPSQLPSTLLNRRPDIVQAQRQLVAADATLASSQA 297

Query: 302 NMFPRLALTGGFGSESTSLSELLKSPYAV--MEGALLTPIFGWGKNRAALKGKKAAYEAE 359
            + P + LT     +  +L +LL +P  +  + G++L P+       A +    A     
Sbjct: 298 QLLPSINLTATGSLQDRTLPDLLDNPLRLWSLGGSILAPLLNRQALNAQVDVSMAQRNQA 357

Query: 360 IHSYEKTVLTAFKETRNAIVNFNKIKEVYALRANLERSAKSYMDLAQLQYINGVINYLDV 419
           ++SYEKTV  A KE  +++    +  E  +     E+ A+  + +AQ +Y NG  +YLDV
Sbjct: 358 LYSYEKTVRGALKEVNDSLDAIGRYGEQLSELQAQEKVAQETLRIAQNRYRNGYSSYLDV 417

Query: 420 LDAQRGYFDAQIGLSNAIRDELITVVQLYKALGGGW 455
           LDAQR  F  Q+ +     + L+  V LY++LGGGW
Sbjct: 418 LDAQRTLFSTQLSVVQVKNNLLLAQVDLYRSLGGGW 453