Pairwise Alignments

Query, 1038 a.a., cation efflux system (AcrB/AcrD/AcrF family) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1066 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  368 bits (944), Expect = e-105
 Identities = 281/1073 (26%), Positives = 505/1073 (47%), Gaps = 69/1073 (6%)

Query: 1    MKNIIKFAVGNPVTICMVVFALLLLGKVSYDQLSVDLLPDLNNPRLFIELKAGERPPEEI 60
            ++ +I+ AV + + + + +   +    V   +L++D  PD+ N ++ +   A     EE+
Sbjct: 2    LQKLIEQAVRSRLIVLIFLIGAMAAAAVMLPKLNLDAFPDVTNVQVQVNTAAEGLAAEEV 61

Query: 61   EKQFVKNMESMAIRQSDVTQVSSVIKAGTARITVEYTWTKDM----DEAFLDLQKAMNPF 116
            EK     +ES       VT+V S+ + G + +TV +    D+     + F  LQ A    
Sbjct: 62   EKLISYPVESAMYALPSVTEVRSLSRTGLSIVTVVFEEGTDIYFARQQVFEQLQAAREAI 121

Query: 117  AQNKDITELKITQHDANLSPVVLVGMSHQSITDMAELRKIAESYIRNELIRLEGVAEVTL 176
                 + E+             ++  + +S     ELR + +  ++  ++ + GV +V  
Sbjct: 122  PDGVGVPEIGPNTSGLGQVYQYILRAAPESGIAPDELRSLNDYLVKLIMMPVGGVTDVLS 181

Query: 177  SGEEVSTLTIQTDPYKLDAFQLKIEDIASRIESNNQSISGGRVSELGLQYLVKSSSLFAS 236
             G EV    +Q DP KL ++ LK++D+   +E NN++ +GG     G + LV        
Sbjct: 182  FGGEVRQYQVQVDPAKLLSYGLKLDDVTRALEGNNRN-AGGWFMAKGQEQLV-------- 232

Query: 237  EDDFENLIVGYKAIQQEEASGNNASGTATANSNKAPVFLKEVATVQFLNARPENIVRING 296
                   + GY  +   EA  +  +          PV + +VA V F +      V +  
Sbjct: 233  -------VRGYGLLPAGEAGLDAIAQIPLTEWQGTPVRIMDVAQVAFGSEIRVGAVTMTR 285

Query: 297  KRSIGLS----------IYKEMRFNTVKVVDEVTRQLAVIENALP-GYHFQVISNQGTFI 345
            +   G            I K M  NT   +D++  + A+I+ ALP G  F+V  +Q   +
Sbjct: 286  RDEAGSPQVLGEVVAGVILKRMGANTKATIDDINSRTALIQQALPDGVTFEVFYDQSDLV 345

Query: 346  KSAIGEVKSSAVLGVILAIVVLFVFLRRMGTTLIVSLAIPISIVATFNLMFFNGLSLNIM 405
              A+  V+ + +L  +  + VL +FL  +  T +V L+IP+SI     +M + G+S N+M
Sbjct: 346  TKAVTTVRDALLLAFMFIVAVLALFLVNVRATALVLLSIPVSIALALMVMSYFGMSANLM 405

Query: 406  TLGGLALGAGMLVDNAIVVIESIFRN-------------QEKGLSIKEAAING------- 445
            +LGGLA+  GMLVD ++V++E+IFR+              + GLS ++A   G       
Sbjct: 406  SLGGLAVAIGMLVDGSVVMVENIFRHLTQPEGRVDNGLPTDPGLSEEDAHREGGYGGIAM 465

Query: 446  -----TAEVANAVIASTLTTIVVFLPIVYLHGASGELFKDQAWTVTFSLVSSLFVAILVI 500
                   EV + +  +TL  IVVF P+  L G  G+LF+  A ++  +++S+L VA++V+
Sbjct: 466  RILQAAREVCSPIFFATLIIIVVFAPLFALEGVEGKLFQPMAVSIILAMLSALMVALVVV 525

Query: 501  PMLYIQLSGKKVKLEEVKSIRIT--GYSRVLRKLIQRRWLVIGMAVLLLIVTGLLTPFIG 558
            P L + L  + V L +   +     GY RVL  ++ R   V   A++L  ++  L P +G
Sbjct: 526  PALAVYLFRRGVHLRQSPLLTPIDKGYRRVLGAVMARPKTVGITALVLFGLSMALLPRLG 585

Query: 559  TEFMPRAESKTFTAVIKMPEGTQMERTSAAVGNLEELLYAIVGGDSLCTVYSHIG--EGS 616
            TEF+P  E  T    + +     ++ +      LE +L      D      S IG  E  
Sbjct: 586  TEFVPELEEGTINLRVTLAPTASLDTSLMVAPKLEAMLMEFPEVDY---ALSRIGAPELG 642

Query: 617  GSENAIFEGENTAMMKVILSPECTLSPEKVIASFVESAKNPDGLELTIQQD-ENSLSSLL 675
            G    +   E    +K I   +   S  ++     E      GL  T  Q     +  LL
Sbjct: 643  GDPEPVSNIEIYIGLKPIDEWQSAASRAELQRLMEEKLSVFPGLLFTFSQPIATRVDELL 702

Query: 676  GSEGAPIVVEVKGEELDEIAQLTEEVKERMIGVNGIYDVITSVEDGAPEVVISIDRTIAG 735
                A + +++ G +LD +A+  +++ E +  V G  DV      G  ++V+  DR    
Sbjct: 703  SGVKAQLAIKLFGPDLDVLAEKGQQLSELVSKVPGAVDVSLEQVSGEAQLVVRPDRARLA 762

Query: 736  INNLSVAMVIEQLKQQLSGKEVGKMEYRGEMRDIVIKVPDIPLSSLGA----LVIKSGTQ 791
               +SV  V+  +   + G + G++       DI +++     +S  A    L++ +   
Sbjct: 763  RYGISVDEVMNLVSTGIGGSDAGQVIDGNARYDINVRLKADTRASADAIADLLLVGANGA 822

Query: 792  EFVLQEIVTITHGQAPKEILRRNQSRIGKVMANMDASKSLDKVAAEVRETVKGIELPANY 851
               L E+  +    AP  I R +  R   V AN+ + + +  V  ++   V   +LP  Y
Sbjct: 823  RVRLGEVADVVVEMAPPNIRRDDVQRRVVVQANV-SGRDMGSVVKDIYALVPEADLPPGY 881

Query: 852  SITVTGEEEKRQESMNSLLFALMLSVVLVYMVMASQFESLLHPFTILLTIPLAVVGAILL 911
            +++V G+ E +Q +   L+  + +S+ L+ +++   F +L     I+  +PLA++G ++ 
Sbjct: 882  TVSVGGQYENQQRAQARLMLVVPVSIGLIALLLYFSFGALKQVGLIMANVPLALIGGVVA 941

Query: 912  FFITGTTINMMGVIGIVMLGGIAVNNSIILVDRINQLSQAGMELTDAIVEAGQQRIRPII 971
             +++GT +++   IG + L G+AV N ++LVD INQ    G  L  A+ E    R+RP++
Sbjct: 942  LYVSGTYLSVPSSIGFITLFGVAVLNGVVLVDSINQRRAGGEGLYQAVYEGTAARLRPVL 1001

Query: 972  MTTLTTILAMLPMTFSFGEGASLRSPMAIAVIGGLITSTLMSLMVIPCVYYVL 1024
            MT LT+ L ++P+  S G G+ ++ P+A+ +IGGL +ST ++L+V+P +Y  L
Sbjct: 1002 MTALTSALGLIPILLSSGVGSEIQQPLAVVIIGGLFSSTALTLLVLPTLYMAL 1054