Pairwise Alignments

Query, 1038 a.a., cation efflux system (AcrB/AcrD/AcrF family) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1036 a.a., acriflavin resistance protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  362 bits (929), Expect = e-104
 Identities = 272/1039 (26%), Positives = 504/1039 (48%), Gaps = 62/1039 (5%)

Query: 8    AVGNPVTICMVVFALLLLGKVSYDQLSVDLLPDLNNPRLFIELKAGERPPEEIEKQFVKN 67
            ++  PV   ++   ++L G + Y  L V   P ++   + +         + IE Q  + 
Sbjct: 7    SIKRPVLAIVMNLLIVLFGIIGYTFLGVREYPSIDPTVVSVRTSYPGANSDIIESQITEP 66

Query: 68   MESMAIRQSDVTQVSSVIKAGTARITVEYTWTKDMDEAFLDLQKAMNPFAQN--KDITEL 125
            +E        +  +SS    GT+ IT+E+   K+++EA  D++  ++  A+   KDI  L
Sbjct: 67   LEKSINSIDGIRNISSSSNQGTSNITIEFNLDKNIEEAANDVRDKVSQAARTLPKDIDGL 126

Query: 126  KI-TQHDANLSPVVLVGMSHQSITDMAELRKIAESYIRNELIRLEGVAEVTLSGEEVSTL 184
             + ++ DAN  P++ + +       + EL   AE+ I + +  + GV+ V + G+    +
Sbjct: 127  PVVSKADANSDPILSMTIQSDKRNTL-ELSDFAENVIADRIQTIPGVSSVQIQGQRKYAM 185

Query: 185  TIQTDPYKLDAFQLKIEDIASRIESNNQSISGGRVSELGLQYLVKSSSLFASEDDFENLI 244
             I  DP KL A+ L  +DI + +++ N  +  G+++    +  VK+     +E  F NLI
Sbjct: 186  RIWMDPNKLSAYGLTSQDIVTALDNENVELPSGKITGATTELTVKTLGKLTNESQFNNLI 245

Query: 245  VGYKAIQQEEASGNNASGTATANSNKAPVFLKEVATVQFLNARPENIVRINGKRSIGLSI 304
            +                    A+SN+  V LK+V          E ++R +G+  + ++I
Sbjct: 246  L-------------------KADSNQV-VKLKDVGYAVLGPENEETVLRESGRPMVAIAI 285

Query: 305  YKEMRFNTVKVVDEVTRQLAVIENALP-GYHFQVISNQGTFIKSAIGEVKSSAVLGVILA 363
              +   N + +  E   +   ++  +P     +V  +   FIK ++ EV  +  L ++L 
Sbjct: 286  IPQPGANYLDISKEFYNRFDKLKADIPKDIKLKVALDNTLFIKRSVTEVAETIGLSLVLV 345

Query: 364  IVVLFVFLRRMGTTLIVSLAIPISIVATFNLMFFNGLSLNIMTLGGLALGAGMLVDNAIV 423
            I+++++F R         + IP+S+V TF +M+  G S+N+++L  + L  G++VD+ IV
Sbjct: 346  ILIIYLFFRDWAIAFRPLIDIPVSLVFTFFIMYAFGFSINVLSLLAIVLATGLVVDDGIV 405

Query: 424  VIESIFRNQEKGLSIKEAAINGTAEVANAVIASTLTTIVVFLPIVYLHGASGELFKDQAW 483
            V E+IF+  E+G+S  EAAI G+ E+  AVI+ ++T   VFLP+++L G  G LF++   
Sbjct: 406  VTENIFKKVEEGMSPFEAAIKGSNEIFFAVISISITLAAVFLPVIFLQGFVGRLFREFGV 465

Query: 484  TVTFSLVSSLFVAILVIPML--YIQLSG-----KKVKLEEVKSIRIT-GYSRVLRKLIQR 535
             +  +++ S FV++ + PML  Y+   G     +     E   +++   Y   L K + +
Sbjct: 466  VIGAAVLVSAFVSLTLTPMLNAYLMKKGGHKPSRFYNWTEPYFVKLNDAYESNLNKFLDK 525

Query: 536  RWLVIGMAVLLLIVTGLLTPFIGTEFMPRAESKTFTAVIKMPEGTQMERTSAAVGNLEEL 595
            RWL + + ++ + +  L    +  E  P  +          PEG     T   +  L +L
Sbjct: 526  RWLSVPIILVCMGLIFLFWKILPKETAPYDDRSAININATTPEGASFTYTDQFIMKLNQL 585

Query: 596  LYAIVGGDSL-CTVYSHIGEGSGSENAIFEGENTAMMKVILSPECTLSPEKVIASFVE-- 652
            +   V   ++  T+ S    GSGS N+ F      +   ++ PE     +K IA  +   
Sbjct: 586  VLDSVPEKNVNITITSPGFGGSGSVNSGF------VRMGLVDPEDRKRSQKDIADMLTRV 639

Query: 653  SAKNPDGLELTIQQDENSLSSLLGSEGAPIVVEVKGEELDEIAQLTEEVKERMIGVNGIY 712
            + K  +G  +  QQ   S+       G PI   ++ +  ++   L E++   M  V+   
Sbjct: 640  TKKYTEGKTIVNQQPTISVGR---RGGLPISYIIQAQNFEK---LREKIPLFMDAVSK-- 691

Query: 713  DVITSVED-----GAPEVVISIDRTIAGINNLSVAMVIEQLKQQLSGKEVGKMEYRGEMR 767
            D   +V D       PE+ ++IDR  A    +S++ + + L   LSG+        G+  
Sbjct: 692  DPTFTVSDVNLKFNKPEINLTIDRDKAKNLGVSISAIAQTLNLGLSGQRFSYFFMNGKQY 751

Query: 768  DIVIKVP----DIPLSSLGALVIKSGTQEFV-LQEIVTITHGQAPKEILRRNQSRIGKVM 822
             ++ +        PL  L ++ +++   E V L  +VT     +P ++ R N+     V 
Sbjct: 752  QVIGQFDRGDRKDPLD-LSSVYVRNDKGELVQLDNVVTAKEESSPPQLYRNNRFIAATVS 810

Query: 823  ANMDASKSLDKVAAEVRETVKGIELPANYSITVTGEEEKRQESMNSLLFALMLSVVLVYM 882
            A +   KS+ +   +  + +    L   +S  ++GE    +ES ++  FA  L+++LVY+
Sbjct: 811  AGLAPGKSIGE-GIDAMDAISKKVLDETFSTDLSGESRDFKESSSNTFFAFGLALLLVYL 869

Query: 883  VMASQFESLLHPFTILLTIPLAVVGAILLFFITGTTINMMGVIGIVMLGGIAVNNSIILV 942
            ++++QFES   P  I+LT+P+AV GA L  ++ G + N+   IG +ML G+   N I++V
Sbjct: 870  ILSAQFESFKDPIIIILTVPMAVAGAFLSLWLCGQSWNIFSQIGTIMLIGLVTKNGILIV 929

Query: 943  DRINQLSQAGMELTDAIVEAGQQRIRPIIMTTLTTILAMLPMTFSFGEGASLRSPMAIAV 1002
            +  NQL + G+ + +AI EA   R+RPI+MT+L   +  LP+  + G  A  R  M   +
Sbjct: 930  EFANQLKEKGIPIPEAIREAAVSRLRPILMTSLAIAIGALPIALALGAAAKSRMSMGTVI 989

Query: 1003 IGGLITSTLMSLMVIPCVY 1021
            +GG + S +++L VIP +Y
Sbjct: 990  VGGTLFSLVLTLFVIPAIY 1008