Pairwise Alignments

Query, 498 a.a., putative outer membrane lipoprotein silC precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 478 a.a., TolC family outer membrane protein from Ralstonia sp. UNC404CL21Col

 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 26/378 (6%)

Query: 115 TDGTISLINRFGWQDNSSIIEGDKTS----NRAFSNDLY-LQLTQPIFTYNKRKMELKQI 169
           T G   L+ + G   +S+ I  D+T+    N+ FS+  + L L+QP+F +++ +   KQ 
Sbjct: 62  TQGRAGLLPQIGGAWSSTRIIFDQTAPAEFNKTFSSTGWTLSLSQPLFRWDRWET-YKQG 120

Query: 170 EYDYENANISYALQQLNTEKSITDQFYSVYMAQSNLEISREELVNAQQSYDIIKNKVEAD 229
           E   + A  S A  QL+        ++ V  AQ  L+++  +    QQ Y+  +   +  
Sbjct: 121 EIAAQAAEASLAQAQLDLITRTAQAYFDVLNAQDTLQLATAQRDAIQQQYEQARRNFDVG 180

Query: 230 LAAKDELFQAELNLATARSSVDESQVNLENAKDKLKQTLGMRLDEDILVFAEVEIK-PIQ 288
            A   +   A+       +SV  ++ + E  +  LKQ +G  +     V   V I  P  
Sbjct: 181 NANITDANDAQARRDAIDASVIAARSDFEIKQSALKQIIGEPVGTLAGVRPGVTIPLPEP 240

Query: 289 VNLDQAISHGLGSRLELRQREIESKELEFDMIKTKALNEFKGDVSISFGLIGDNSHLNKV 348
            + +  +       L++   +   +  E D+ K  A     G +  S  L+    H N  
Sbjct: 241 ASAEPWVDQARSCNLQVALAQYNLQSAERDVKKATA-----GHLP-SVDLVAQTGHTNAS 294

Query: 349 YNN--PT-------QNPRVSISFAVPIFDWGEKKARIKAQKMAQR--INELEFQEDKVDI 397
            N   P+        + ++ +  ++PIF  G  ++R++     +    N+LEF       
Sbjct: 295 GNQYLPSLPGGARFDSSQIGVQVSIPIFAGGAIQSRVRENIALETKAANDLEFARRSA-- 352

Query: 398 ELNIRQVWRNLENLRTQIKIAEQNVQNAQLTYDLNQTRYREGDITGMEMSQFQTQLSNKK 457
           E   RQ +  +     Q+K  E    +A+  YD NQ  Y  G   G ++   Q QL   +
Sbjct: 353 EQGARQAYIGVIAGLAQVKALEAAELSARTAYDSNQLAYGVGVRIGTDVLNSQAQLFQAR 412

Query: 458 ITYTQALINYRIELLNLK 475
               +A  +  +  L LK
Sbjct: 413 RDLARARYDTIVNGLRLK 430