Pairwise Alignments

Query, 230 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 267 a.a., two component transcriptional regulator, LytTR family from Sphingomonas koreensis DSMZ 15582

 Score = 67.0 bits (162), Expect = 3e-16
 Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 24/187 (12%)

Query: 30  DLIFSDIRLADGDVFEAFRKVM---PQSFVIFTTAYDEYAMEAIKNNGLDYLMKPID--- 83
           DL+F DI++   D F   + +M   P  FV F TAY ++A+ A + N +DYLMKP+D   
Sbjct: 50  DLVFLDIQMPGFDGFSVVQGLMEVEPPLFV-FVTAYSDHAIRAFEANAMDYLMKPVDEAR 108

Query: 84  -ADELRAAIGKLRLNRNAQQ-------------SAVESPLHGVLNDTRQYRERFLITKGD 129
            AD L     +L   R  ++              A E    G   +    R   LI   D
Sbjct: 109 LADTLERVRQRLTEKRGVEEVEKLKEVLAEVAPDAAEELASGDTAEVASNRYEKLINIKD 168

Query: 130 --ELCMLCADDISYINMHDNRITAFAVDGTSYPLAMSMNDLEQALDPSRFFRLNRQYIAN 187
             ++  +  D I  +    + +     D T   L  +M DLE+ LDP RF R++R  I N
Sbjct: 169 RGQIFRVDVDTIEVVEAAGDYMCIKTADNT-LVLRETMKDLEKRLDPRRFQRVHRSTIVN 227

Query: 188 INGIRKI 194
           ++ ++++
Sbjct: 228 LDQVKQV 234