Pairwise Alignments

Query, 133 a.a., peptidyl-prolyl cis-trans isomerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 255 a.a., periplasmic peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  107 bits (267), Expect = 1e-28
 Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 3/131 (2%)

Query: 4   KQEYKETNLEFLKELSSQEGVYALPCGIYYKVLETGTGTVFPNVRSIVTVHYKGSLINGR 63
           K +   +N  FL E   + GV     G+ Y+VL  GTG   P  + IV+VHY+G LI+G+
Sbjct: 120 KAQQLASNSSFLVENGKKPGVTTTESGLQYEVLTLGTGPK-PGPKDIVSVHYEGQLIDGK 178

Query: 64  VFDNSYERNCPEAFRLCDVIDGWQLALQRMRAGDKWIIYIPYTMGYGTRAS--GPIPAFS 121
           VFD+S++RN P  F L  VI GW   LQ M  G K+ + +P+ +GYG+R +  G IP F+
Sbjct: 179 VFDSSFKRNAPATFSLDQVIKGWTEGLQLMPVGSKFRLTLPHDLGYGSRGALGGEIPPFA 238

Query: 122 TLVFEVELLGV 132
           TL F +ELL +
Sbjct: 239 TLEFVIELLDI 249