Pairwise Alignments

Query, 220 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 214 a.a., response regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 68.6 bits (166), Expect = 9e-17
 Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 6/214 (2%)

Query: 6   IADNQDISKAGMMFLLSRQKDVSVLLEADNKAELIQQLRLYPQAVVILDYTLFDFAGADE 65
           + D+ ++ + G+  +L  ++ + V+ EA +    +Q  R     V+++D  +    G + 
Sbjct: 6   LVDDHELVRTGIRRILEDERGIKVVGEAPDGETAVQWARQNEADVILMDMNMPGMGGLEA 65

Query: 66  LIVLQERFKEADWILFSDELSINFLRQVLFSSMAFGVVMKDNSKEEIMSALQCASRKQRY 125
              +      A  I+ +      F  +V+ +  A G + K  +  E++ A++  SR QRY
Sbjct: 66  TRKILRYQPHAKIIVLTVHTEDPFPSKVMQAG-ASGYLTKGATPPEVLQAIRQVSRGQRY 124

Query: 126 ICNHVSNLLLSGTASSAASPATVDDH-LLTQTEKNILKEIALGKTTKEIAAEKNLSFHTI 184
           +   ++  +    A S  +PA  +    L++ E  I+  I  G+   +I+ + NLS  T+
Sbjct: 125 LSPEIAQQM----ALSQFNPADENPFKALSERELQIMLMITNGEKVNDISEQLNLSPKTV 180

Query: 185 NSHRKNIFRKLGVNNVHEATKYAMRAGIVDLAEY 218
           NS+R  +F KLG++   E T+ A+R  ++D   +
Sbjct: 181 NSYRYRLFAKLGISGDVELTRLAIRYKMLDAGHF 214