Pairwise Alignments

Query, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 375 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Pseudomonas stutzeri RCH2

 Score =  217 bits (553), Expect = 3e-61
 Identities = 129/356 (36%), Positives = 200/356 (56%), Gaps = 18/356 (5%)

Query: 7   LSGGVDSSVVVHLLCEQGYKPTLFYIKIGM--DGAEYMDCSAEEDIEMSTAIARKYGLSL 64
           +SGGVDSSV   LL EQGY+    ++K     DG EY  C+A+ED+  + A+  + G+ L
Sbjct: 18  MSGGVDSSVSALLLLEQGYQVEGLFMKNWEEDDGTEY--CTAKEDLADAQAVCDRIGIKL 75

Query: 65  EVVDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCF-EQQVGKNFDFTATGHYA 123
              +   EYW+NV  + + + K G TPNPD++CN+ IKF  F +  +    D  ATGHY 
Sbjct: 76  HTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDYALMLGADLIATGHYV 135

Query: 124 TTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGLPSA 183
               +DG++ L    DP KDQ+ FL  +   Q+ K +FP+G L K  VR IA +  L +A
Sbjct: 136 RRRDRDGRSELLKGLDPNKDQSYFLHAVGGEQLGKTLFPVGELEKPAVRAIAEKYDLATA 195

Query: 184 RRKDSQGICFLGKINYNDFVRRFLGEREGAIIELETGKKVGTHRGYWFHTIGQRKGLGLS 243
           ++KDS GICF+G+  ++DF++++L  + G  IE   G+ +G H G  +HTIGQR+GLG+ 
Sbjct: 196 KKKDSTGICFIGERRFSDFLKQYLPAQPGN-IETVDGEVIGRHHGLMYHTIGQRQGLGIG 254

Query: 244 G------GPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAGKEIDI 297
           G       PW+V+ KD++ N + V  G      F      ++ +++  NP  D    + +
Sbjct: 255 GLKDASDEPWYVLSKDLQRNALVVGQGNDHPWLFSRALLASEIYWV--NP-IDLSTPLKL 311

Query: 298 TFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEEAGICVGSGEI 353
           T K+R+  +  +   +++    +R +     + + PGQ  V YD E  IC+G G I
Sbjct: 312 TAKVRYR-QSDQACTLEKTAEGYRAVFEAPQRAVTPGQSVVFYDGE--ICLGGGVI 364