Pairwise Alignments

Query, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 398 a.a., tRNA-specific 2-thiouridylase MnmA from Sinorhizobium meliloti 1021

 Score =  135 bits (340), Expect = 2e-36
 Identities = 111/368 (30%), Positives = 172/368 (46%), Gaps = 29/368 (7%)

Query: 3   IAALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYM---DCSAEEDIEMSTAIARK 59
           +   +SGGVDSSVV  LL  +GY      +++   GA       C A +DI+ +  +   
Sbjct: 15  VVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCET 74

Query: 60  YGLSLEVVDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFG---CFEQQVGKNFDF 116
            G+   V+D    + E V     +    G TP P V CN+ +KF       +++G   D 
Sbjct: 75  IGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA--DA 132

Query: 117 TATGHYATTI-----RQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEV 171
            ATGHY  +      R  G+  L    D  +DQ+ FL      Q+  L FP+GGL K E 
Sbjct: 133 LATGHYIRSRPSPKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLPKSET 192

Query: 172 REIASRAGLPSARRKDSQGICFLGKINYNDFVRRFL--GEREGAIIELETGKKVGTHRGY 229
           R +A   GL  A++ DSQ ICF+ +  Y+D V +        G I+ L+ G+ +G H G 
Sbjct: 193 RALAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALAGEIVHLD-GRVLGAHEGI 251

Query: 230 WFHTIGQRKGLGL-SGGPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPW 288
             +TIGQR+G+G+ +G P +V+  D     + V     +ET+      + D +++ +   
Sbjct: 252 LHYTIGQRRGIGVATGEPLYVVYLDSRSRRVIVGPKEALETR---RVYLRDVNWLGDEEL 308

Query: 289 K-DAGKEIDITFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEEAGIC 347
           +  AG+  +   K+R T       L  +  G + +   E   G+APGQ   +Y       
Sbjct: 309 EAAAGQGFECFAKVRSTRRPAPAVLKSDAEGLY-VELVEGEAGVAPGQACALYS------ 361

Query: 348 VGSGEITR 355
            G+GE  R
Sbjct: 362 -GTGEDAR 368