Pairwise Alignments

Query, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 369 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Sphingomonas koreensis DSMZ 15582

 Score =  132 bits (332), Expect = 1e-35
 Identities = 111/349 (31%), Positives = 153/349 (43%), Gaps = 23/349 (6%)

Query: 3   IAALLSGGVDSSVVVHLLCEQGYKP---TLFYIKIGMDGAEYMDCSAEEDIEMSTAIARK 59
           I   +SGGVDSSVV  L    G +    TL     G        C A  DI  + A+  +
Sbjct: 17  IVVAMSGGVDSSVVAALAARTGAETIGVTLQLYDHGEATGRSGSCCAGRDIRDARAVCDR 76

Query: 60  YGLSLEVVDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKF-GCFEQQVGKNFDFTA 118
            G++  V D    + E V     D+   G TP P V CN   KF   F        D  A
Sbjct: 77  LGIAHYVFDHESSFREQVIDDFADEYLAGRTPIPCVKCNMGPKFTDLFALARDLGADCLA 136

Query: 119 TGHYATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRA 178
           TGHY   +       L    DP +DQ+ FL      Q+  L FP+G + K  VREIA+  
Sbjct: 137 TGHYVQRVVGPEGPELHKGADPARDQSYFLFATTRDQLDFLRFPLGAMPKARVREIAAEI 196

Query: 179 GLPSARRKDSQGICFLGKINYNDFVRRFLGERE--GAIIELETGKKVGTHRGYWFHTIGQ 236
           GL  A + DSQ ICF+   +Y   V++   E +  G I++ E G  +G HRG    T+GQ
Sbjct: 197 GLGVAAKPDSQDICFVPDRDYARLVKKLRPEADTAGKIVD-EAGNVLGEHRGLIHFTVGQ 255

Query: 237 RKGLGLSGG--PWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAGKE 294
           R+GL + G   P +VI+ D E   + V     +  +      IN         W     +
Sbjct: 256 RRGLEIGGSPEPLYVIRLDPERREVVVGPKAALAVRAARIEGIN---------WLGGSYD 306

Query: 295 IDITFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEE 343
             +T K+R        ++   EGG  R++      G+APGQ  V+Y  E
Sbjct: 307 GPMTAKVRSMARPAPARM---EGG--RVVFDTPEYGVAPGQAAVLYAGE 350