Pairwise Alignments

Query, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 384 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  135 bits (341), Expect = 1e-36
 Identities = 112/365 (30%), Positives = 169/365 (46%), Gaps = 20/365 (5%)

Query: 3   IAALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMD---CSAEEDIEMSTAIARK 59
           +   +SGGVDSSVV   L  +GY      +++   GA       C A  DI  +  +A +
Sbjct: 26  VVVAMSGGVDSSVVAAELACEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAEE 85

Query: 60  YGLSLEVVDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKF-GCFEQQVGKNFDFTA 118
            G    V+D    + E V     D    G TP P + CN+ +KF    E       D  A
Sbjct: 86  MGFPHYVLDYENTFREAVIDEFADSYLGGATPVPCIRCNERVKFKDLLETARDLEADCMA 145

Query: 119 TGHYATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGL-MKQEVREIASR 177
           TGHY        K  L +A D  +DQ+ FL      Q+  L FP+G L  K E R +A++
Sbjct: 146 TGHYIQRKMGPAKAELHSAADANRDQSYFLFSTTQEQLDYLRFPLGHLASKAETRALAAK 205

Query: 178 AGLPSARRKDSQGICFLGKINYNDFVRRF---LGEREGAIIELETGKKVGTHRGYWFHTI 234
            GL  A + DSQ ICF+   +Y   + +     GE  G I++++ G  +G HRG   +TI
Sbjct: 206 HGLSVADKPDSQDICFVPNGDYASVIEKLRPGAGE-PGEIVDMD-GTVLGAHRGVIHYTI 263

Query: 235 GQRKGLGLSG--GPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAG 292
           GQR+GLG+ G   P +V+K D +   + V     + T+      + + +++ + P     
Sbjct: 264 GQRRGLGIGGLETPLYVVKLDPDARRVIVGPKEALSTR---HVPLREINWLGDAPLSSRA 320

Query: 293 KEIDITFKIRHT--PEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEEAGICVGS 350
            E  I  K+R T  P     + + +      +L+ E  +G++PGQ  V YD +     G 
Sbjct: 321 -EWPIAVKVRSTRPPRDAILRPISDTEATVELLTPE--EGVSPGQACVFYDPDGTRIFGG 377

Query: 351 GEITR 355
           G I R
Sbjct: 378 GWIWR 382