Pairwise Alignments

Query, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 407 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA from Caulobacter crescentus NA1000

 Score =  137 bits (344), Expect = 6e-37
 Identities = 109/357 (30%), Positives = 164/357 (45%), Gaps = 29/357 (8%)

Query: 3   IAALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMD---CSAEEDIEMSTAIARK 59
           I A +SGGVDS+V   LL   GY      +++   GA       C A +DI  +   A +
Sbjct: 37  IVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAER 96

Query: 60  YGLSLEVVDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKF-GCFEQQVGKNFDFTA 118
            G+   V+D    + E V     D   +G TP P V CN+ +KF    +       +  A
Sbjct: 97  IGIPHYVLDYESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLGAEAMA 156

Query: 119 TGHY---ATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIA 175
           TGHY   A       +  L  A DP KDQ+ FL      Q+  L FP+GG+ K  VR +A
Sbjct: 157 TGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTVRAVA 216

Query: 176 SRAGLPSARRKDSQGICFLGKINYNDFVRRF--LGEREGAIIELETGKKVGTHRGYWFHT 233
           +  GL  A + DSQ ICF+ +  Y   + R    G   G ++ L+ G+ +G H G   +T
Sbjct: 217 AGLGLSIADKPDSQDICFVPEGKYTTVIDRIRPQGAEAGDVVHLD-GRVLGRHEGVTRYT 275

Query: 234 IGQRKGLGLS-GGPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAG 292
           IGQR+GL ++ G P FV+K + ++  + V            E  +     + E  W  A 
Sbjct: 276 IGQRRGLNIAVGDPLFVVKINADKRQVIVG---------PREALLTASLTLKEGSWLGAQ 326

Query: 293 KEID--------ITFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYD 341
             ++        +  ++R T E   G+L   +G    +    + +G+APGQ  V+YD
Sbjct: 327 DSLEAAAEDGQRVLARVRSTREPVPGRLAMIDGALSVVFDGAE-EGVAPGQACVLYD 382