Pairwise Alignments

Query, 355 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 372 a.a., tRNA-specific 2-thiouridylase MnmA (RefSeq) from Shewanella sp. ANA-3

 Score =  217 bits (553), Expect = 3e-61
 Identities = 126/356 (35%), Positives = 191/356 (53%), Gaps = 15/356 (4%)

Query: 7   LSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCSAEEDIEMSTAIARKYGLSLEV 66
           +SGGVDSSV  +LL +QGY+    ++K   +      C+A ED++ + A+  K G+ L  
Sbjct: 17  MSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKLGIKLHT 76

Query: 67  VDLHKEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQQVGK--NFDFTATGHYAT 124
           V+   EYW+NV  Y + + K G TPNPD+MCNK IKF  F        + D+ A GHY  
Sbjct: 77  VNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFADDILDADYIAMGHYVR 136

Query: 125 TI-RQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGLPSA 183
                DG T +    D  KDQ+ FL  + + QV++ +FP+G L K EVREIA + GL + 
Sbjct: 137 RRDNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKKMGLITH 196

Query: 184 RRKDSQGICFLGKINYNDFVRRFLGEREGAIIELETGKKVGTHRGYWFHTIGQRKGLGLS 243
            +KDS GICF+G+  + +F+  +L  + G  IE   G+ +G H+G  + T+GQRKGLG+ 
Sbjct: 197 DKKDSTGICFIGERKFTEFLGNYLPAQPGN-IETAEGEIIGKHQGLMYQTLGQRKGLGIG 255

Query: 244 G------GPWFVIKKDVEENIIYVSHGYGVETQFGSEFRINDFHFITENPWKDAGKEIDI 297
           G       PW+V+ KD++ N++ V  G        +   +N  H++     K   +   I
Sbjct: 256 GMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDR---KGPAEGSQI 312

Query: 298 TFKIRHTPEFTKGKLVQEEGGQFRILSSEKLQGIAPGQFGVIYDEEAGICVGSGEI 353
             K R+  +     L   +    +++  E +  + PGQ  V YD E  +C+G G I
Sbjct: 313 VVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGE--VCLGGGII 366