Pairwise Alignments

Query, 635 a.a., NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 512 a.a., NADH dehydrogenase (quinone) from Marinobacter adhaerens HP15

 Score =  348 bits (893), Expect = e-100
 Identities = 189/511 (36%), Positives = 289/511 (56%), Gaps = 15/511 (2%)

Query: 54  CKASSSQGITENLQKAIER--NGITDKVDVITVGCFGFCEKGPIVKIIPDN--TFYTQVT 109
           C  ++     + + K IER  N    +++++  G  G     P+V++  D+    +  V 
Sbjct: 9   CDTTALSMGADKVAKLIERHANARGLEIELVRNGSRGLFWLEPLVEVETDSGRIGFGPVE 68

Query: 110 PEDAEEIISEHIIGGRRIERLLYIDPKTEQTVSDSKHMDFYRKQLRIALRNCGFIDSENI 169
             D + ++   +  G+    L          +   + + + + Q R+     G  D  +I
Sbjct: 69  AHDVDALVDAGLFEGKSDHPLC---------LGMVEDISYLKLQQRLTFSRIGITDPLSI 119

Query: 170 EEYIAREGYFALADCLLNKQPADVIDIIKRSGLRGRGGGGFPTGLKWEFASKQV-SNVKY 228
            +Y +  G+  L   + +  P  ++D +K SGLRGRGG  FPTG+KW+    +     KY
Sbjct: 120 ADYRSHGGFVGLEQAV-SLSPQAIVDEVKASGLRGRGGAAFPTGIKWQTVHDEPWQQQKY 178

Query: 229 VVCNADEGDPGAFMDRSIMEGDPHSIVEAMCICGYSIGSSKGLVYIRAEYPLAINRLKKA 288
           +VCNADEGD G F DR  ME DP+ ++E M I G ++G+++G +Y+R+EYP+A   L +A
Sbjct: 179 IVCNADEGDSGTFADRLAMECDPYMLIEGMTIAGLAVGATQGFIYLRSEYPVAHRILNEA 238

Query: 289 IEQAREYGLLGDHILGTDFSFDIEIRYGAGAFVCGEETALIHSMEGKRGEPTLKPPFPAE 348
           I +A   G LG  + G+  +F++E+R  AGA++CGEET+L+ S+EGKRG    KPP PA 
Sbjct: 239 ISRAEAEGYLGRDVRGSGRAFNLEVRLAAGAYICGEETSLLESLEGKRGLVRAKPPLPAI 298

Query: 349 SGYLGKPTNVNNVETLANIPIILTKGAEWFASIGTERSKGTKVFALAGKINNVGLIEVPM 408
            G  G+PT VNNV + A +P IL KG + +A  G  +S+GT    LAG I   GLIE+  
Sbjct: 299 KGLFGQPTVVNNVLSFAAVPFILAKGGQTYAHYGMGKSRGTLPIQLAGNIRRGGLIELAF 358

Query: 409 GTTLREVIYEIGGGIKGGKKFKAVQTGGPSGGCLTEKHLDTPIDFDNLLAAGSMMGSGGM 468
           G +LRE++ + GGG   G+  KAVQ GGP    + +   DTP+D++     G+ +G GG+
Sbjct: 359 GVSLREILEDFGGGTFTGRPMKAVQVGGPLMAYMPQNQWDTPMDYEAFAQLGAGIGHGGV 418

Query: 469 IVMDEDDCMVSVARFYLDFTVEESCGKCTPCRIGNKRLLELLNKITEGRGTEKDLDTLAT 528
           +V D+   M   ARF ++F   ESCGKCTPCRIG+ R LE++++I  G   E +L  L  
Sbjct: 419 VVFDDTVDMGEQARFAMEFCTVESCGKCTPCRIGSVRGLEVIDRIRAGESPEANLVLLEE 478

Query: 529 LGRVIKDTALCGLGQTSPNPVLSTLDNFRDE 559
           L   + D +LC +G  +P PV S +  F D+
Sbjct: 479 LCETMVDGSLCAMGGMTPFPVQSVMKYFPDD 509