Pairwise Alignments

Query, 301 a.a., putative permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 330 a.a., permease (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  179 bits (455), Expect = 6e-50
 Identities = 88/294 (29%), Positives = 173/294 (58%), Gaps = 4/294 (1%)

Query: 6   DTLQYFVFITIELIALFLLISAAVEIILMYIPEETIRKKLSGSG-IMGNVIAAGFGALTP 64
           + +++F++ T +++ L  L+   + ++  +   +  R+ L+G G  +GNV+AA  G +TP
Sbjct: 37  EAVEFFLYDTPKVLMLLSLVVFGIGLVRSFFTPQRTRRLLAGRGEAVGNVLAALLGIVTP 96

Query: 65  FCACSTIPMTVGFLNAGVPFGSTMSFLIASPLLNPIIIGMLGALVGFKAMVFYFVIAFIC 124
           FC+CS +P+ +GF++AGVP G T SFL+++P++N I + ML  L+G+K    Y       
Sbjct: 97  FCSCSAVPLFIGFVSAGVPLGVTFSFLVSAPMINEIAVVMLYGLLGWKVAALYAGTGLAI 156

Query: 125 SVAFGYVLEKIGAQKYVKNVRVKPSCCSGSEQPKNKRLLPFRQKIKIAFINAWGSLRPIM 184
           ++  G+++ ++G +++++   ++        +  +   L +  +I          +  + 
Sbjct: 157 AIVSGWIIGRLGMERHIEGWVLQ---VRAEAEQMHDAGLSWSGRIDYGVQAMRDIVGKVW 213

Query: 185 IYLLIGVALGAGIYGYMPQDFVLKIAGADNPLAIPVAAVLGIPLYIRAETAIPIGIALMG 244
            ++++G+A+GAGI+GY+P+ F+  I G     A+P+A  +GIP+Y  A   IP+  AL+G
Sbjct: 214 PWVVLGIAVGAGIHGYVPEGFMASIMGRGAWWAVPLAVAIGIPMYSNAAGMIPVVQALLG 273

Query: 245 KGMSIGAVIALVIGGAGMAIPEMSMLASIFKKKLVGMIVAVIFLTAVIAGYVFN 298
           KG ++G V+A ++    +++PE  ML  + K +LV +   V+ L  ++ GY+FN
Sbjct: 274 KGAALGTVLAFMMAVIALSLPEAVMLRRVLKPRLVAVFFGVVGLGIMLVGYLFN 327