Pairwise Alignments

Query, 280 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

 Score =  106 bits (265), Expect = 5e-28
 Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 8/276 (2%)

Query: 8   KHGALWTVLFAVVSLFWIFPIVLVLINSFKQKAYISKNAFSLPAGKAFVGFENYVRG-VE 66
           +    W VL  +V  + + P++ +   S K  + + K+   +P+   F  +    RG + 
Sbjct: 4   RRATYWAVLDTLVVGYALLPVLWIFSLSLKPTSTV-KDGKLIPSTVTFDNYRGIFRGDLF 62

Query: 67  TTQFFASFGWTLLITVGSVILILVCTSMCAWWIVRVNNWAAKLLYTLFLFNMIVPFQMVM 126
           ++    S G  L+ TV +V+L     +M A+ + R+     +LL    L   + P   ++
Sbjct: 63  SSALINSIGIGLITTVIAVVL----GAMAAYAVARLEFPGKRLLIGAALLITMFPSISLV 118

Query: 127 FTLSKIADMLKLNTPW-GLCIVYLGFGAGLAVFIFTGVIKGIPAELEESAMIDGASVPRI 185
             L  I   + L   W GL + Y+ F   LA++  +   + IP +LE++A +DGA+  + 
Sbjct: 119 TPLFNIERAIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQA 178

Query: 186 FFQIVVPIMKPSIVSVAILEAMWIWNDYLLPYLTLDLGKYKTISVAVQYLKGGYGSVD-M 244
           F +++VP+  P +V+ AIL  ++ WND LL           T  VA+    G     +  
Sbjct: 179 FRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPT 238

Query: 245 GAMMACLVLAIIPIIVFYLVCQKYIVSGVMAGAVKG 280
           G++ A  ++  IPIIVF L+ Q+ IV+G+ +GAVKG
Sbjct: 239 GSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVKG 274