Pairwise Alignments

Query, 280 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 277 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 62/270 (22%), Positives = 128/270 (47%), Gaps = 13/270 (4%)

Query: 11  ALWTVLFAVVSLFWIFPIVLVLINSFKQKAYISKNAFSLPAGKAFVGFENYVRGVETTQF 70
           A WT+     ++ W  P++  +  +F   AY ++   + P     +  EN+V       F
Sbjct: 20  AAWTL-----AIMWALPLLYAIWTAFHPSAYSTRFTLNAP-----LTLENFVTAWHAAPF 69

Query: 71  FASFGWTLLITVGSVILILVCTSMCAWWIVRVNNWAAKLLYTLFLFN-MIVPFQMVMFTL 129
              F  T+L+    +   LV  ++ A+   + +     +++ L L   MI+P  +V+   
Sbjct: 70  ALYFVNTVLLVTMVLAAQLVLCTLAAYAFAKYDFRGKNIMFALVLMQLMIMPDVLVVENY 129

Query: 130 SKIADMLKLNTPWGLCIVYLGFGAGLAVFIFTGVIKGIPAELEESAMIDGASVPRIFFQI 189
             +A +  L++   + + Y+    G  +F+     K IP EL+E+A ++GAS  +I +++
Sbjct: 130 RTMASIGVLDSTLAIGLPYMASAFG--IFLLRQTFKSIPKELDEAAAVEGASTLQILWKV 187

Query: 190 VVPIMKPSIVSVAILEAMWIWNDYLLPYLTLDLGKYKTISVAVQYLKGGYGSVDMGAMMA 249
            VP+ KP  ++ A++   + WN++L P +  +    + ++V +Q        VD   + A
Sbjct: 188 YVPLGKPVYLAYALVSISYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWAIITA 247

Query: 250 CLVLAIIPIIVFYLVCQKYIVSGVMAGAVK 279
             ++   P++V +L+ Q+  V   M   +K
Sbjct: 248 ATLMTSGPLLVAFLLFQRQFVQSFMRAGIK 277