Pairwise Alignments

Query, 339 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Bifidobacterium breve UCC2003

Subject, 237 a.a., rRNA (cytidine-2'-O-)-methyltransferase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  167 bits (424), Expect = 2e-46
 Identities = 84/223 (37%), Positives = 132/223 (59%), Gaps = 3/223 (1%)

Query: 50  GTVVLAATPIGNVGDASARLVAFLERADIVAAEDTRRLFDLARRLGVYVNGRVVAYHDHN 109
           G + L  TPIGN+ D + R +  L+  D++ AEDTR    + +  G+  + RV ++H HN
Sbjct: 3   GKLFLVPTPIGNLEDMTFRAIRILKECDLILAEDTRTSAPMLKHFGI--DKRVFSHHQHN 60

Query: 110 ERDKADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDAL 169
           E      ++  +  G  + ++SDAG P I+DPG  +VR AI+  + V C PG +A + AL
Sbjct: 61  EHKATSEIIKFLNEGQKIALISDAGTPAISDPGFFLVREAIKNDIAVECLPGATAFVPAL 120

Query: 170 ALSGLPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMDDLLDAFGPN 229
             SGLP D FC+EGFLP K   + ++ + L  E RTI+ YE+PHR+  ++++     G +
Sbjct: 121 VNSGLPADAFCFEGFLPVKKGRQTKF-KKLAEEDRTIILYESPHRLLKTLEEFAQYLGAD 179

Query: 230 RPMALCRELTKDYEQIRRGPIGEIRQSVIDDPPRGEMVLVIGG 272
           R  ++ RELTK +E+  RG + EI+    ++  +GE V+ I G
Sbjct: 180 RQASVSRELTKMFEETVRGTLVEIKSHFENNTLKGEFVICIAG 222