Pairwise Alignments

Query, 339 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Bifidobacterium breve UCC2003

Subject, 290 a.a., ribosomal RNA small subunit methyltransferase I from Caulobacter crescentus NA1000

 Score =  174 bits (441), Expect = 2e-48
 Identities = 102/266 (38%), Positives = 146/266 (54%), Gaps = 7/266 (2%)

Query: 54  LAATPIGNVGDASARLVAFLERADIVAAEDTRRLFDLARRLGVYVNGRVVAYHDHNERDK 113
           L ATPIGN+ D + R +  L   D++ AEDTR    L    G+    R+  + +H     
Sbjct: 21  LVATPIGNLRDITLRALDVLAGCDVLLAEDTRVTGKLLSAYGIRT--RLERHDEHVAERS 78

Query: 114 ADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDALALSG 173
             G+L+++  G  V +VSDAG P ++DPG  + R AI  G  V   PG SA L AL L+G
Sbjct: 79  IPGILERLAAGERVALVSDAGTPMVSDPGYRLAREAIAAGHDVIPIPGASAALAALTLAG 138

Query: 174 LPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMDDLLDAFGPNRPMA 233
           LPT+RF + GF P K A R  +       R T++FYE   R+AD + D+   FG +RP A
Sbjct: 139 LPTERFLFAGFPPPKSAARRTFFEEFANTRATLIFYEGASRVADCLADMAAVFGADRPAA 198

Query: 234 LCRELTKDYEQIRRGPIGEIRQSVIDDPPRGEMVLVIGG-----ASSEEAEAAAPSTLSV 288
           +CRELTK YE   RGP+ ++      D P+GE+V+++G      AS+++AEAA    ++ 
Sbjct: 199 VCRELTKLYETCVRGPLSDLAADPRFDAPKGEIVILVGPGAEKVASADDAEAALREAMAR 258

Query: 289 EDMAVLAIDRALEDGLRIKDAIAQVV 314
             +   A + A   GL  KD   Q +
Sbjct: 259 LPLGEAASEVAKALGLSRKDLYRQAL 284