Pairwise Alignments

Query, 601 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

Subject, 758 a.a., ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  341 bits (874), Expect = 7e-98
 Identities = 190/573 (33%), Positives = 325/573 (56%), Gaps = 10/573 (1%)

Query: 24  RVGKYLKPYISRIVRILAVVVSMSCIVVSVPYLTKIMIDDA-IPNKDLGKL------AML 76
           R+ ++ KPY   ++    + ++ +   +  PY+T  ++D+  IP ++   +        L
Sbjct: 170 RLSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTHLATLYL 229

Query: 77  AGGLFCLIVIYELALRYRTVAITRVGQLMLKDMRRDLFTHIQTLPFSYFDSRPHGKILIR 136
           +G L   ++ + L    RT  +  V + +  D+R   ++H+  L   YF  +  G ++ R
Sbjct: 230 SGLLGAAVLAWGLGWA-RTYILALVSERIGADLRTTTYSHLLRLSQEYFGGKRTGDLMAR 288

Query: 137 VVNYVNTLSDALSSGLINVFSDIFTFFVTLIVMFAIDWQLALWSLVLFPVLIIWVRVLQY 196
           + +  + +   LS  L++   D+    +T  ++ +I+  LAL +L+  P +   + V++ 
Sbjct: 289 IGSETDRICVFLSLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVRD 348

Query: 197 FQRKAYQVLSNKQSNLNAFIHESIAGVKTTQTFAREKEQFDTFQQQQDDVRTAWMAAKHI 256
             R  ++ +    S +   + ++I G++  + FA+EK +   F++              I
Sbjct: 349 RLRHGFEKIDRIWSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKI 408

Query: 257 EFLMWPGVQTISVMTIAFIYFVGITGFGGVSVTTGMLIAFVGYANNFWNPVINIGNFYNQ 316
             L  P V  ++ + +  ++  GI       +T G+L AF+ Y + F+  + ++    + 
Sbjct: 409 WSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSV 468

Query: 317 LVTCSAYLERIFETLDVKPEIANKPGATELPAIQGKVDFNDVVFRYEDDGRNILNLVDFH 376
               +A  +RIF+ LD    +        L  +QG ++  ++ FRY +  R ++  +   
Sbjct: 469 TQKAAAGAKRIFDILDHVSSVPEPANPVHLEKVQGAIEVRNIGFRYGN--RAVIRNMSLS 526

Query: 377 VTPGKTIALVGPTGAGKTTIVSLLSRFYDVSEGSVTIDGHDVRDVTLESLRRQMGVMLQD 436
           + PG+ I LVG +G+GK+T+V+L+ RFYDVSEG++ IDG D+R + +   RR +G++LQ+
Sbjct: 527 IAPGEMIGLVGHSGSGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQE 586

Query: 437 TFIFSGNVRDNIRYGKLDATDEEIEAAAKAVHAHEFIMELPDGYDTTVEERGSTLSAGQR 496
            F+F G + +NI YGK +AT EEI AAA+A HAHEFI+ LP GYD+ V ERG  LS G+R
Sbjct: 587 PFLFFGTIAENIAYGKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGER 646

Query: 497 QLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLRHLLKGRTSFIIAHRLSTIENAD 556
           Q I+ AR LL DPRILILDEATS++DT TE+ +Q  L +L++GRT+  IAHRLST+  AD
Sbjct: 647 QRISIARALLIDPRILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKAD 706

Query: 557 QIFYIDHGQIVEHGTHAELLEAKGAYYRLYESQ 589
           ++  +D GQ+VE G H EL+  +G YY+LY++Q
Sbjct: 707 RLVVLDRGQVVEVGNHEELMAREGHYYKLYQAQ 739