Pairwise Alignments

Query, 601 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

Subject, 607 a.a., phospholipid-lipopolysaccharide ABC transporter from Caulobacter crescentus NA1000

 Score =  293 bits (750), Expect = 1e-83
 Identities = 195/576 (33%), Positives = 303/576 (52%), Gaps = 17/576 (2%)

Query: 27  KYLKPYISRIVRILAVVVSMSCIVVSVPYLTKIMIDDAIPNKDLGKLAMLAGGLFCLIVI 86
           ++L+P     +  +   V ++ + V +    +  +D  I +   G L  +   +  L V 
Sbjct: 21  EFLQPRWKGFLVSMISAVIVARLTVMLGEYVEPAVDKLIAHPQPGALIWVPLTIAALAVG 80

Query: 87  YELALRYRTVAITRVGQLMLKDMRRDLFTHIQTLPFSYFDSRPHGKILIRVVNYVNTLSD 146
             +    +   I R+G  ++ DM+  LF  +     +       G  +  V+     + +
Sbjct: 81  RGVFQVIQASLINRIGNGVVGDMQTRLFGRLIRADLARLRGAHSGSYVASVLYDAGLIRE 140

Query: 147 ALSSGLINVFSDIFTFFVTLIVMFAIDWQLALWSLVLFPVLIIWVRVLQYFQRKAYQVLS 206
           A ++G++N   +     +TL  +F  D  LA   L++ P +   +R       KA +   
Sbjct: 141 AATTGVVNYVREALIVAITLWALFNSDPILAAGVLIIVPGVSGVIRHFAKRTTKAAKGAM 200

Query: 207 NKQSNLNAFIHESIAGVKTTQTFAREKEQFDTFQQQQDDVRTAWMAAKHIEFLMWPGVQT 266
            + SNL+  I ES+ GVK  +   RE  +        +  +   +   +   +  P  + 
Sbjct: 201 GETSNLSTAIMESLDGVKIVKMENREAYEEARVAAVVERRQRHLIKGSNARAMAAPATEL 260

Query: 267 ISVMTIAFIY----FVGITG------FGGVSVTTGMLIAFV---GYANNFWNPVINIGNF 313
            S + IA ++    +  ITG      F    +T G  + FV   G A      V N+   
Sbjct: 261 FSQLVIAAVFAYAGWRAITGALVVGPFTLPPITPGGFLKFVILLGIAAQSLRQVANLQTV 320

Query: 314 YNQLVTCSAYLERIFETLDVKPEIANKPGATELPAIQGKVDFNDVVFRYEDDGRNILNLV 373
           +++ +T +    R+FE LDV P I +   A  LP  +  +   DV F Y  D    L+ V
Sbjct: 321 FSEGLTAA---RRLFEALDVAPTIVDPADAKALPPGESMIALADVTFSYGAD-IPALSSV 376

Query: 374 DFHVTPGKTIALVGPTGAGKTTIVSLLSRFYDVSEGSVTIDGHDVRDVTLESLRRQMGVM 433
           +     G+T+ALVGP+G GK++I++L+ RFYDV+ G+VTIDGHDVR VT+ SLR ++ ++
Sbjct: 377 NLQARKGETVALVGPSGGGKSSILNLIPRFYDVNAGAVTIDGHDVRSVTIASLRDRIALV 436

Query: 434 LQDTFIFSGNVRDNIRYGKLDATDEEIEAAAKAVHAHEFIMELPDGYDTTVEERGSTLSA 493
            Q+ F+F   +R NI Y +  A+  EIEAA++   AHEFI  LP+GYDT V E G+ LS 
Sbjct: 437 TQEPFLFDDTIRANIAYARPGASQLEIEAASRQAAAHEFIQALPEGYDTAVGEGGARLSG 496

Query: 494 GQRQLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLRHLLKGRTSFIIAHRLSTIE 553
           GQRQ IA AR  L D  IL+LDEATS +DT +E  +QA L  L+ GRT+ +IAHRLST++
Sbjct: 497 GQRQRIAIARAFLKDAPILLLDEATSALDTESEAQVQAALERLMAGRTTILIAHRLSTVK 556

Query: 554 NADQIFYIDHGQIVEHGTHAELLEAKGAYYRLYESQ 589
           NAD+I+ ID G++VE G+HAEL+ A G Y RL ++Q
Sbjct: 557 NADRIYVIDKGRVVETGSHAELVRAGGLYARLAKAQ 592