Pairwise Alignments

Query, 297 a.a., dihydrodipicolinate synthase family protein from Bifidobacterium breve UCC2003

Subject, 294 a.a., dihydrodipicolinate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (308), Expect = 6e-33
 Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 13/284 (4%)

Query: 8   SGIICPSITITKDDGDIDYERWGQHLDHLIEAGINGVLVFGSIGEFYAFPLDVKKQAVDF 67
           +G I   IT    DG +D+    + ++  I+ G + ++  G+ GE    P++     V  
Sbjct: 3   NGSIVALITPMNSDGSVDFASLERLVEFHIDQGTDAIVAVGTTGESATLPMNEHVTVVAQ 62

Query: 68  VAKHVAGRIKVFAGVGDTNLNNVIDFARAVEASGVDALVVVSPYYFGPTAGGAKAYFGAV 127
             K  AGRI V  G G       I+  +++   GV A++ V+PYY  PT  G  A++ AV
Sbjct: 63  TVKFAAGRIPVIGGNGANATAEAIELTKSLSKVGVAAMLGVTPYYNKPTPKGLVAHYKAV 122

Query: 128 AEATNLPVILYNFPPRTGSDLTPELVAELAAAHPNIVGIKDTVDTISHTRKVIRAVKAVN 187
           A +T++P ILYN P RT  D+ PE VAEL +   NI+G+K+    +S   +V R  +   
Sbjct: 123 AASTDIPQILYNVPGRTAVDMKPETVAELVSV-SNIIGVKEATGDVS---RVKRLRELCG 178

Query: 188 PRFAVFSGFDEYYLVNRVSGGDGVICGMTNVEPETFVTLHRAYEAGDYGTAIEAAERISH 247
             F ++SG D       + GG+GVI    N+ P+ F  +  A  AG+   A  AA     
Sbjct: 179 NDFMLYSGDDATASEFLLLGGNGVISVANNIVPKAFKAMCDAALAGN---AELAASIDEP 235

Query: 248 LMALYDQTDLFISA----IKGAVKAKGLNISTLIREPAVQLTAQ 287
           L  LY  + LF  A    +K A    GL     IR P  +L+ Q
Sbjct: 236 LRGLY--STLFCEANPIPVKWAAHRMGLIECGHIRLPLTELSEQ 277