Pairwise Alignments

Query, 1020 a.a., ribonuclease E/G from Bifidobacterium breve UCC2003

Subject, 502 a.a., ribonuclease G (RefSeq) from Shewanella amazonensis SB2B

 Score =  290 bits (741), Expect = 2e-82
 Identities = 156/418 (37%), Positives = 250/418 (59%), Gaps = 16/418 (3%)

Query: 544 MVVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQAR 603
           +++    +  ++++VE  +L E ++    +   VGNIY G++  VLP M+AAFVDIG  +
Sbjct: 19  LLINVTPNEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLDK 78

Query: 604 NGVLYAGEVN------WDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVT 657
              L+A ++        D  +     R I    + G  ++VQV KDP+G KGARLT+ +T
Sbjct: 79  AAFLHASDIMPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTTDIT 138

Query: 658 LAGRFLVLVPSGGMTGVSRKL-SERERSRLKGIVSKIAPKDMGVIIRTAAEGASEEAIVK 716
           L  R+LV +P     GVS+++ SE ER+RLK        +D G IIRTAAEGA  E + +
Sbjct: 139 LPSRYLVFMPGSAHVGVSQRIESEDERTRLKEATLPFVDEDGGFIIRTAAEGAGAEELAQ 198

Query: 717 DLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFGKLIVEGDKVYDR 776
           D   L R W ++  +R+     K   LL  +  + +R+VRD    D  ++ V+    ++ 
Sbjct: 199 DAAFLRRVWAKVAERRKR----KGSSLLYQDLALPVRIVRDFVGTDLDRIQVDSRSTFEE 254

Query: 777 IEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRT 836
           ++ +     P+ ++K+E +  +      +FD + +++++++ + R+V L SGG ++ID+T
Sbjct: 255 LKHFAQEFMPEFEEKIELYSGSV----PIFDLYDVENEIQRALGRKVELKSGGYLIIDQT 310

Query: 837 EAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPAN 896
           EAMTT+D+NTG F+G  ++LEET+   NLEA++ IARQLRLR++GG+++ID++DM+   +
Sbjct: 311 EAMTTVDINTGAFVGH-RNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLSEDH 369

Query: 897 RDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFI 954
           R  VL  L   LA DR K  V+  + LGLV+MTRKR  + L      ECP CKG G++
Sbjct: 370 RQRVLSSLTSALAHDRVKTNVSGFSGLGLVEMTRKRTRESLEHVLCGECPACKGSGYM 427