Pairwise Alignments

Query, 3160 a.a., type I polyketide synthase from Bifidobacterium breve UCC2003

Subject, 314 a.a., malonyl-CoA-(acyl-carrier-protein) transacylase FabD from Caulobacter crescentus NA1000

 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 20/142 (14%)

Query: 1365 AFVYPGQGIQKQGMVLDERAKSAAARDVWERADKLTRAKLGFSILGLVRDNPKELTANGV 1424
            AF++PGQG Q  GM  D     +AAR+V++  D      LG  +  L+++          
Sbjct: 4    AFIFPGQGSQSVGMGADLAEAFSAAREVFQEVDD----ALGQKLFALMKEG--------- 50

Query: 1425 TYRHPEGLLNLTQFTQVALATVAFAQTARL-REAGADIWPAYF-AGHSLGEYNALSAFAD 1482
                PEG L LT+  Q AL  V+ A T  L +E G  I  A F AGHSLGEY+AL+A A 
Sbjct: 51   ----PEGDLTLTENAQPALMAVSLAVTRTLEKEFGVGIDKAAFVAGHSLGEYSALAA-AG 105

Query: 1483 VIPLETVLELVFHRGSTMHHLI 1504
             I L     L+  RG  M   +
Sbjct: 106  AISLSDTARLLKLRGQAMQRAV 127



 Score = 27.3 bits (59), Expect = 0.005
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 41/173 (23%)

Query: 109 YSVAAAKPVAVLGHSQGVLAVHMTRAIEAAGSIEAAGKTLDEILAVAALIGAAGTRRVRE 168
           + V   K   V GHS G  +     A+ AAG+I     +L +   +  L G A  R V  
Sbjct: 80  FGVGIDKAAFVAGHSLGEYS-----ALAAAGAI-----SLSDTARLLKLRGQAMQRAV-- 127

Query: 169 LGLNPKYGEASPMLSVKGATREQVEALVKRVNNARGPISIAVTNSDNHH---VLSGHPED 225
                  GE + M S+ G   +   AL +    A   + + V  +DN++   V+SG    
Sbjct: 128 -----PVGEGA-MASLIGPKTDL--ALAEAAAAAGSEVGVCVVANDNNNGNVVISG---- 175

Query: 226 LAALALETEREHQHQAKLREQKLHGGTVFNPTLEYLEVTLPFHSPLMAEAVEQ 278
            A  A++   E   +   R   L+             V+ PFH PLM  A ++
Sbjct: 176 -AKAAVDKAIEKAKELGARAIPLN-------------VSAPFHCPLMQPAADE 214