Pairwise Alignments

Query, 424 a.a., DNA polymerase IV from Bifidobacterium breve UCC2003

Subject, 366 a.a., DNA polymerase IV from Pedobacter sp. GW460-11-11-14-LB5

 Score =  206 bits (524), Expect = 9e-58
 Identities = 114/321 (35%), Positives = 186/321 (57%), Gaps = 5/321 (1%)

Query: 23  VLHIDMDAFYASLEVARNPGLKGKPVIIGTGP--RSVVSAASYEARRYGINSAMPAARAH 80
           ++HIDMDAFYAS+E    P  +GKP+++G  P  R VVS ASYEAR+YGI SAM +++A+
Sbjct: 12  IIHIDMDAFYASVEQRDFPEYRGKPLVVGGKPDSRGVVSTASYEARQYGIRSAMSSSKAY 71

Query: 81  QLCPDGVFLPVDMAYYRMMSHRIMHEVFLTITDQFEQVSVDEGYMDVSGALLEWDKPSAI 140
           QLCP  +F+      Y  +S + + E+F   TD  E +S+DE Y+DV+   L       I
Sbjct: 72  QLCPTAIFVYPRFDAYTAVS-KALREIFSRYTDLIEPLSLDEAYLDVTEDKLGIGSAIDI 130

Query: 141 GAWIRQQVAERFNVTCSVGIACNKLVAKMASTNAKPNGMLLIPAARSAQFVQMMPLRGIP 200
              I+  +    N+T S G++ NK VAK+AS   KP+G+  I  ++   F++ +P+    
Sbjct: 131 AQSIKDAIKNELNLTASAGVSINKFVAKVASDMNKPDGLTFIGPSKIKAFMEKLPVEKFF 190

Query: 201 GIGPSLEKRLNAWGVHSVAELAQMDKAALIQATGSPAAARGLWAASHGLDSREIATTREE 260
           G+G     ++ A  +++ A+L ++ +A L+   G   + R  +    G+D R + + RE 
Sbjct: 191 GVGKVTGAKMKAMQINTGADLKKLTEAQLVAQFGK--SGRFYYKIVRGIDERPVQSHRET 248

Query: 261 KSIGSERTLTEDTRDMHIVCRLLRSACDEVARTLRRKGLVARTLTVKLRFADLSYQTRSF 320
           KS+G+E T  EDT +  ++  LL+   + VA+ L +  L  +T+T+K++FAD    TRS 
Sbjct: 249 KSVGAEDTFPEDTNEDSVMHDLLKQISETVAKRLEKYQLSGKTVTLKIKFADFKLITRSR 308

Query: 321 TMEQPTDTASTLYPECVRQLK 341
           +   P + A  +Y E ++ L+
Sbjct: 309 SFAAPINKAEVIYAEAIKLLE 329