Pairwise Alignments

Query, 424 a.a., DNA polymerase IV from Bifidobacterium breve UCC2003

Subject, 439 a.a., DNA polymerase IV from Pedobacter sp. GW460-11-11-14-LB5

 Score =  179 bits (454), Expect = 1e-49
 Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 5/297 (1%)

Query: 23  VLHIDMDAFYASLEVARNPGLKGKPVIIGTG-PRSVVSAASYEARRYGINSAMPAARAHQ 81
           ++H+D DAF+ S+E+ +NP L GKPVIIG G  R VV++ SYEAR+YGI+SAMP   A  
Sbjct: 7   IIHMDQDAFFVSVEIRKNPKLSGKPVIIGGGGDRGVVASCSYEARQYGIHSAMPGRTAKL 66

Query: 82  LCPDGVFLPVDMAYYRMMSHRIMHEVFLTITDQFEQVSVDEGYMDVSGALLEWDKPSAIG 141
           LCP  +FL  DM  Y   SH I  EV       FE+ S+DE Y+D++G +  +       
Sbjct: 67  LCPQAIFLKGDMEEYSKASHEIT-EVIADKVPLFEKASIDEHYIDMTG-MDRFFGCMKFA 124

Query: 142 AWIRQQVAERFNVTCSVGIACNKLVAKMASTNAKPNGMLLIPAARSAQFVQMMPLRGIPG 201
           + +RQ +     +  S G++ NK VAK+A+  +KP+G + +   +   F+  + +  IPG
Sbjct: 125 SELRQTIIREMGLPISFGLSINKTVAKIATNESKPSGEMQVTFPQLRPFLDPLAIHKIPG 184

Query: 202 IGPSLEKRLNAWGVHSVAELAQMDKAALIQATGSPAAARGLWAASHGLDSREIATTREEK 261
           IG +  K+L+  GV  +  L Q+ +  + +  G    +  LW  ++G+D   +   RE K
Sbjct: 185 IGHATYKKLSEMGVREILTLTQIPQQLMFKILGQHGLS--LWQKANGIDLSPVVPYRERK 242

Query: 262 SIGSERTLTEDTRDMHIVCRLLRSACDEVARTLRRKGLVARTLTVKLRFADLSYQTR 318
           SIG++ T   DT DM  +  ++      +   LR +  +   +TV +R+ +    T+
Sbjct: 243 SIGTQATFESDTMDMAKLKAIITGMVTGLTFQLRNQKKLTACITVTVRYTNFETVTQ 299