Pairwise Alignments

Query, 266 a.a., 30S ribosomal protein S3 from Bifidobacterium breve UCC2003

Subject, 228 a.a., ribosomal protein S3, bacterial type from Pseudomonas stutzeri RCH2

 Score =  236 bits (601), Expect = 4e-67
 Identities = 120/222 (54%), Positives = 157/222 (70%), Gaps = 4/222 (1%)

Query: 1   MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
           MGQK++P G RLGI + H S W++D    G  Y D++L D  +R+ +   L+ A VSRI 
Sbjct: 1   MGQKVHPTGIRLGIVKEHTSVWYAD----GRTYADYLLADLNVREYLQDKLKSASVSRID 56

Query: 61  IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
           I R     R+ IHTARPGIVIG++G + E++R  L K  G  V +NI E++   LDA LV
Sbjct: 57  IHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLV 116

Query: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMHAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
           AQ +A+QL  RV FRRAM++A Q+AM  GAKGI+I++SGRLGGAE++R+E+YREGRVPL 
Sbjct: 117 AQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLH 176

Query: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQ 222
           TLRA IDY  +EA TTYG IGVKVWI+KG++     EE + Q
Sbjct: 177 TLRADIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRHEELKPQ 218