Pairwise Alignments

Query, 266 a.a., 30S ribosomal protein S3 from Bifidobacterium breve UCC2003

Subject, 232 a.a., 30S ribosomal protein S3 from Pantoea sp. MT58

 Score =  230 bits (586), Expect = 2e-65
 Identities = 121/236 (51%), Positives = 165/236 (69%), Gaps = 10/236 (4%)

Query: 1   MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
           MGQK++P G RLGI +   S WF+++N+    + D +  D ++R+ ++K+L +A VSRIV
Sbjct: 1   MGQKVHPNGIRLGIVKPWNSTWFANTNE----FADNLDSDFKVRQFLTKELAKASVSRIV 56

Query: 61  IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
           IER    +RV IHTARPGIVIG++G + E++R  + K+ G   Q+NI EV+   LDA+LV
Sbjct: 57  IERPAKSIRVTIHTARPGIVIGKKGEDVEKLRTVVAKIAGVPAQINIAEVRKPELDAKLV 116

Query: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMHAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
           A  I  QL  RV FRRAM++A Q+AM  GAKGI++++SGRLGGAE++R+E+YREGRVPL 
Sbjct: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176

Query: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDM------TESEFEEQQAQQNNRPGRR 230
           TLRA IDY   EA TTYG IGVKVWI+KG++       E      Q ++  R GR+
Sbjct: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRKGRK 232