Pairwise Alignments

Query, 499 a.a., DNA repair protein RadA from Bifidobacterium breve UCC2003

Subject, 480 a.a., DNA repair protein RadA (DNA repair protein SMS) from Mycobacterium tuberculosis H37Rv

 Score =  394 bits (1011), Expect = e-114
 Identities = 233/495 (47%), Positives = 294/495 (59%), Gaps = 50/495 (10%)

Query: 1   MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAA 60
           +A +  QY CSEC     KW GRC ECG+WGTV+E        G+         R RS A
Sbjct: 1   VANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGT---------RRRSVA 51

Query: 61  VPDTARAAAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ 120
                 + A PI+ +         TG  E DRVLGGG+VPGSVTL+AG+PG+GKSTLLL+
Sbjct: 52  ----PASGAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLE 107

Query: 121 TAGNIARTVAEGQTINAAGRGQSSHRPSGLASTRAHTVLYISGEESQAQVRLRATRINA- 179
            A   A               QS  R            LY+SGEES  Q+RLRA RI   
Sbjct: 108 VAHRWA---------------QSGRR-----------ALYVSGEESAGQIRLRADRIGCG 141

Query: 180 --VEPNLLLAATTDLATVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASAL 237
             VE  + LAA +D+ TVL  IE  +PAL IVDS QT+ + E DG++GG TQVR V +AL
Sbjct: 142 TEVE-EIYLAAQSDVHTVLDQIETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAAL 200

Query: 238 IDTAKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAAKNRFGPT 297
              AK  ++ + LVGHVTKDG+IAGPR+LEHLVDVV  FEGD   ALRM+R  KNRFG  
Sbjct: 201 TAAAKANEVALILVGHVTKDGAIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAA 260

Query: 298 DEVGCFDMSGEGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQALV 357
           DEVGCF +   GI+ + DP+ LFL           PV GT +T TLDG R L  EVQAL+
Sbjct: 261 DEVGCFLLHDNGIDGIVDPSNLFL------DQRPTPVAGTAITVTLDGKRPLVGEVQALL 314

Query: 358 TNSVLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIV 417
                 +PRRAV+G+  +R AM+ AVL +H++L +  ND+Y+ST+ G +  EP +DLA+ 
Sbjct: 315 ATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDIYLSTVGGMRLTEPSADLAVA 374

Query: 418 GALASAATSKPIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVHV 477
            ALASA  + P+  +   IGE+ L G +R V  M  RL EAAR GFT A++PP   PV  
Sbjct: 375 IALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAARQGFTIALVPPSDDPV-P 433

Query: 478 DGLKLVEASTLADAL 492
            G+  + AST+  AL
Sbjct: 434 PGMHALRASTIVAAL 448