Pairwise Alignments

Query, 232 a.a., ribose-5-phosphate isomerase RpiA from Bifidobacterium breve UCC2003

Subject, 260 a.a., ribose 5-phosphate isomerase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  181 bits (460), Expect = 9e-51
 Identities = 106/239 (44%), Positives = 146/239 (61%), Gaps = 13/239 (5%)

Query: 1   MDKAQQDALKKAAGIEAAKLIEDGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSR 60
           +D+A+  A K+A G      +EDGM  GLGTGST  ++V  L     +EG++ T V TS 
Sbjct: 8   IDRAKYVAAKRAVGF-----VEDGMRVGLGTGSTAAWMVRHLAETVDQEGMDITCVATST 62

Query: 61  RTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIV 120
           RT   A    + +  +D+V  +D+TIDGADE D   N IKGGG ALL EKIVAT S++++
Sbjct: 63  RTAELARDLKLHVTTLDEVKWLDLTIDGADEFDPTLNLIKGGGGALLQEKIVATASDRMI 122

Query: 121 WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKKFEER-------GYKPVLRLDAEGKEVRT 173
            I D SK V T+G FPLPVEVI FG        EE        G + +LR++  G    T
Sbjct: 123 VITDASKAVATLGAFPLPVEVIRFGWETTRTLIEETLVNVDVGGREAILRME-NGMPYVT 181

Query: 174 DENNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNGPRVMTNANK 232
           DE NF+VDLHLERI +P++++  L    GVVE+GLFL++ D V++G  +G   + + N+
Sbjct: 182 DEGNFIVDLHLERIGNPRQVSLVLNQLPGVVENGLFLDICDVVVIGKSDGSVELRDINE 240