Pairwise Alignments

Query, 323 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  122 bits (305), Expect = 1e-32
 Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 22  RSGAQKRENRTGWAFMAPFAVLFAFVFILPIIWAIYSSFFRQVTEGGGAYGGGELVNKFV 81
           R G  +  +  GW F+AP   L     + PI W+++ SF            G  +  KF 
Sbjct: 5   RRGIGRYYDVNGWLFVAPALGLITLFMVYPIAWSLWMSF----------QSGRGMTLKFA 54

Query: 82  GFQNFQYVITSGNFWSGVGRVLVYTLIQVPIMIIAALALAIVIDSFVVKHVTGFRLGYFL 141
           GF N   +     F   +   + Y ++QVPIMI+ AL LA ++++  +     FR   FL
Sbjct: 55  GFANIVRLWNDPVFIKALTNTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFL 114

Query: 142 PYAIPGVVASIIW--VYLYNGQISPIVK--GLAAIGV---NVDFFNKNIVLGSMANITTW 194
           P     V  S+++  ++  +G ++  ++  GLAA  +      F+ K +V+ ++    TW
Sbjct: 115 PCVSSLVAYSVLFKGMFATDGIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAI----TW 170

Query: 195 TFTGYNMLIFLAALQAIPHDLYEAARIDGANGWQIATKIKLPNVRGAALLAMLLSIVGTI 254
            +TGYNM+ +LAALQ I   +YE ARIDG   W   T + +P ++   L   ++S +GT+
Sbjct: 171 RWTGYNMIFYLAALQNIDKSIYEVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTL 230

Query: 255 QLFNEPQIMSTADPGISKSYTPMMMAMSTSQGSITPSGDGPASAIAIVMALIAGVLAVLY 314
           QLF+E   ++    G S +   + + +        P+  G A+ ++ V+ ++  +LA + 
Sbjct: 231 QLFDEVYNLTEGKGGPSNATLTLSLYIYNLTFRFMPN-LGYAATVSYVIVVLVALLAFVQ 289

Query: 315 TLAERK 320
             A R+
Sbjct: 290 FFAARE 295