Pairwise Alignments

Query, 323 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 300 a.a., Probable sugar-transport integral membrane protein ABC transporter from Mycobacterium tuberculosis H37Rv

 Score =  101 bits (252), Expect = 2e-26
 Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 28/298 (9%)

Query: 27  KRENRTGWA---FMAPFAVLFAFVFILPIIWAIYSSF-----FRQVTEGGGAYGGGELVN 78
           +R  R  WA   F+AP         + P+ +++Y SF     F   T             
Sbjct: 3   RRRGRRAWAGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHAT------------- 49

Query: 79  KFVGFQNFQYVITSGN-FWSGVGRVLVYTLIQVPIMIIAALALAIVIDSFVVKHVTGFRL 137
            FV   NF+ + TS   F   V    VYT+  V   +I +L +A  ++   +K ++ FR 
Sbjct: 50  -FVRLDNFRNLFTSDPLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNR-KIKGISLFRT 107

Query: 138 GYFLPYAIPGVVASIIWVYLYNGQ--ISPIVKGLAAIGVNVDFFNKNIVLGSMANITTWT 195
             FLP AI  VV +++W +++N    +  I+ G   IG           + S+  ++ W 
Sbjct: 108 VVFLPLAISSVVMAVVWQFVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWR 167

Query: 196 FTGYNMLIFLAALQAIPHDLYEAARIDGANGWQIATKIKLPNVRGAALLAMLLSIVGTIQ 255
              +  ++ LAA+Q +P  +YEAARIDGA   +    I +P +RGA    +++SI+   Q
Sbjct: 168 SVPFATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQ 227

Query: 256 LFNEPQIMSTADPGISKSYTPMMMAMSTSQGSITPSGDGPASAIAIVMALIAGVLAVL 313
            F+   +++ A+ G        ++ +   Q + +    G ASA+A VM  I  VL VL
Sbjct: 228 AFDLVYVLTGANGG--PETATYVLGIMLFQHAFSFLEFGYASALAWVMFAILLVLTVL 283