Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator from Bifidobacterium breve UCC2003

Subject, 215 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.4 bits (246), Expect = 5e-26
 Identities = 63/223 (28%), Positives = 121/223 (54%), Gaps = 21/223 (9%)

Query: 11  VAVVDDHEMFRAGVIATLR--DSFDIVGQAADVPGSVAMIAQTKPQVVLLDVHVPGGEGG 68
           V +VDDHE+ RAG+   L   DS +++G+  D   +VA++ + KP++++LD+ +   +  
Sbjct: 7   VVLVDDHELVRAGIRTLLHTIDSIEVIGECGDGLEAVALVRRLKPKLLVLDISI---KSL 63

Query: 69  GGAEILTKSRAYSPATVFLALSVSDAPQDVGSVIRAGAQGYVTKTITGADLISSIKQVHE 128
            G E++      +     L LS+ +  + V   ++ GA GY+ K     +L  +I  V  
Sbjct: 64  SGMEVVKLISNQAIPVKILILSMHNNVEYVAKCLKNGAHGYLLKDAAVDELEPAITNVLL 123

Query: 129 GYAVFSPK----LAGFVLSAFQGVPAAGADGAAPAHDEELDRLSAREQEVMRLIARGYTY 184
           G++  S +    L   +LS  Q  P+             L+ L+ R++++++LIA GY+ 
Sbjct: 124 GHSYISKEIDISLLEQLLSTNQSAPSL------------LELLTNRQKQILQLIAEGYST 171

Query: 185 KEVAAELFISIKTVETHVSSVLRKLQLSNRTELTRWAADRRIV 227
           +++A  + +SIKTVETH + ++ +LQ+ +   L R+A   +++
Sbjct: 172 RQIAESISVSIKTVETHRAHIMARLQIFDIAGLVRFALQEKLI 214