Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator from Bifidobacterium breve UCC2003

Subject, 219 a.a., XRE family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  129 bits (325), Expect = 3e-35
 Identities = 78/217 (35%), Positives = 123/217 (56%), Gaps = 9/217 (4%)

Query: 9   IRVAVVDDHEMFRAGVIATLR--DSFDIVGQAADVPGSVAMIAQTKPQVVLLDVHVPGGE 66
           IR+ +VDDH +FR+G+   L+     D+VG+A D    V    Q +P VVL+D+++PG  
Sbjct: 3   IRILLVDDHTLFRSGIRLLLQRHPDIDVVGEAVDGLDGVKRALQLRPDVVLMDLNMPGLS 62

Query: 67  GGGGAEILTKSRAYSPATVFLALSVSDAPQDVGSVIRAGAQGYVTKTITGADLISSIKQV 126
           G    +++ +     P T  L LSVS+   D+ + +  GA+GY+ K I    L+ SIK+ 
Sbjct: 63  GLEAMQLIVQDL---PETAVLMLSVSEEADDLTTALHNGARGYLLKNIEADYLVQSIKRA 119

Query: 127 HEGYAVFSPKLAGFVLSAFQGVPAAGADGAAPAHDEELDRLSAREQEVMRLIARGYTYKE 186
             G  V S  +   ++   +    AGA   A +  E  D+L+ARE+  M  IARG + KE
Sbjct: 120 AAGEPVISESMTAKLVMQLR----AGAGNPAASAAEPTDKLTARERATMVCIARGQSNKE 175

Query: 187 VAAELFISIKTVETHVSSVLRKLQLSNRTELTRWAAD 223
           +A  L ++  TV+ HV ++LRKLQLS+R ++  +A +
Sbjct: 176 IARSLEVAESTVKIHVQNLLRKLQLSSRVQIAVYAVE 212