Pairwise Alignments

Query, 391 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 406 a.a., transcriptional regulator from Klebsiella michiganensis M5al

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 92/399 (23%), Positives = 162/399 (40%), Gaps = 56/399 (14%)

Query: 1   MYAKSNPS---DARANNRRLLFRLLFPDRQLSRADLCKETGLSRATATDVTGEMIDDGLL 57
           M A S P      +  N   ++RL+     +SR DL +   L+ A+ T +  EM++  L+
Sbjct: 1   MVADSQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRFAQLAPASITKIVREMLEAHLV 60

Query: 58  RELGSRKRDGRGKPGTLLAIDTDVLRLICIDLSRPYVITGAVMDLRARIVERRE------ 111
           +E   ++   RG+P   L ++T+    + I +SR  +   A+ DL + +V   +      
Sbjct: 61  QETEIQEPGSRGRPAVGLMVETEAWHYLSIRISRGELHL-ALRDLSSALVVEEQLELALQ 119

Query: 112 -------RVLDDGDRVDLDDVLSLVGQMIRLAGSGLVGIGVAVPGVVSGAGRVISSSNLG 164
                  R+LD  D+  +     L           L  I V +PG++     +I      
Sbjct: 120 HVQPFATRLLDHVDQFFIRHQKKL---------ERLTAIAVTMPGIIDTEHGIIHRMPFY 170

Query: 165 WD--DVELRDMLEGEFSLPARVDNDANAALLADHFLG--HGNPNCLLVQITRGIGASVLL 220
            D  D+ L ++L     +   + +D +A  +A+   G   G  + + V I   +GA V+ 
Sbjct: 171 EDVKDMPLGEILANHTGVSVYIQHDISAWTMAESLFGASRGARDVIQVVIDHNVGAGVIT 230

Query: 221 NDEFVDGDDHAAGEIGHVVIDPNGPACTCGKRGCLETYVS------------AIALRDRI 268
           +   +     +  EIGH  +DP G  C CG  GCLET  S            A ++   +
Sbjct: 231 DGRLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVESVLELAQIRMAKSMSSML 290

Query: 269 RRDPNR--------------RADILAEAGARLGEALAMPVSLLNLHDIAVYGPPDIVGET 314
            + P                  DI++  G  +G  LA+ V+L N   I +  P ++  + 
Sbjct: 291 HQQPLSVEWLCQAALQGDLLARDIISGVGNHVGRILAIMVNLFNPQKILIGSPFNLAADI 350

Query: 315 LLNACDETVNSLSRNDYQSGMRVRRCELGDDATLRGQAV 353
           L  A  + +   S   Y   + V   +  +  T+ G A+
Sbjct: 351 LFPAISDCIRQQSLPAYSRHIAVESTQFSNRGTMAGAAL 389