Pairwise Alignments

Query, 391 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 406 a.a., DNA-binding transcriptional dual regulator NagC from Klebsiella michiganensis M5al

 Score =  117 bits (294), Expect = 4e-31
 Identities = 91/382 (23%), Positives = 173/382 (45%), Gaps = 36/382 (9%)

Query: 14  NRRLLFRLLFPDRQLSRADLCKETGLSRATATDVTGEMIDDGLLRELGSRKRDGRGKPGT 73
           N   ++RL+     +SR  + +++ L+ A+ T +T ++I+ GL++E+  +   G G+   
Sbjct: 19  NSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQASTG-GRRAI 77

Query: 74  LLAIDTDVLRLICIDLSRPYVITGAVMDLRARIVERRERVLDDGDRVDLD----DVLSLV 129
            +  +T     I + L R Y  T  + DL ++ +E     L +  +  L+    ++++  
Sbjct: 78  SIVAETRSFHAIGVRLGR-YDATLTLYDLSSKTLEEEHYPLPERTQETLEHALLNIIAAF 136

Query: 130 GQMIRLAGSGLVGIGVAVPGVVSGAGRVIS-SSNLGWDDVELRDMLEGEFSLPARVDNDA 188
            +  +     L+ I V +PG+V     VI    ++  ++  L + LE  F +   V +D 
Sbjct: 137 MESCQRKIRELIAISVILPGLVDPESGVIRYMPHIQVENWGLVEALEKRFKVTCYVGHDI 196

Query: 189 NAALLADHFLG--HGNPNCLLVQITRGIGASVLLNDEFVDGDDHAAGEIGHVVIDPNGPA 246
            +  LA+H+ G  H   + +LV++ RG GA ++ N     G +   GEIGH+ +DP G  
Sbjct: 197 RSLALAEHYFGASHDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVDPLGER 256

Query: 247 CTCGKRGCLETYVSAIALRDRIR--------------------------RDPNRRADILA 280
           C CG  GCLET  +  A+  R+R                          +      +++ 
Sbjct: 257 CHCGNFGCLETVAANAAIEHRVRHLLEQGYQSKISLDDCTIKTICKAANKGDALACEVIE 316

Query: 281 EAGARLGEALAMPVSLLNLHDIAVYGPPDIVGETLLNACDETVNSLSRNDYQSGMRVRRC 340
             G  LG+ +A+ ++L N   + + G      + LL A +  +N+ +   ++  + V R 
Sbjct: 317 HVGRHLGKTIAIAINLFNPQKVVIAGEIVEAEKVLLPAIEACINTQALKAFRKNLPVVRS 376

Query: 341 ELGDDATLRGQAVSVLREIVGG 362
            L D  +  G    V R ++ G
Sbjct: 377 TL-DHRSAIGAFALVKRAMLNG 397