Pairwise Alignments

Query, 455 a.a., exodeoxyribonuclease VII large subunit from Bifidobacterium breve UCC2003

Subject, 442 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella loihica PV-4

 Score =  153 bits (387), Expect = 9e-42
 Identities = 113/413 (27%), Positives = 193/413 (46%), Gaps = 47/413 (11%)

Query: 82  WVTGQITQINTRRAGSAYITLRDDFEDIAMEVNGFGRFADTARQFIQGDRVVIHGKPNLW 141
           W+  +I+  +   +G  Y+TL+D++  I   +      A T R    G +V++ G  +++
Sbjct: 30  WLEAEISNFSAPSSGHWYLTLKDNYAQIRAAMFKGRNRAVTFRP-ANGQQVLVKGAISVY 88

Query: 142 MKRTSLSLRGDTILKVGAGGSLKAMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAP 201
             R    L  D++L  G  G L    + L+ +L  EGLF AD K PLP   + IG++ + 
Sbjct: 89  EPRGDYQLIIDSMLPAG-DGLLAQQYEALKMKLAAEGLFAADTKRPLPSNIQRIGVVTSA 147

Query: 202 QARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPGEVAQAIARLDTDPDVDVIIVARGGG 261
              A  DV+  +  R PS+   +    VQGE     +  AI + +   +VDV+++ RGGG
Sbjct: 148 TGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADKSLCHAIMQANDRMEVDVLLLTRGGG 207

Query: 262 SFEDLMGFSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVN 321
           S EDL  F+ E +    Y    P++S++GHE D T+ D VADLRA TP+ AA+ +  D  
Sbjct: 208 SLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTTISDYVADLRAPTPSAAAELLSQDAL 267

Query: 322 EQTQLITGAIDRMR--------------LRIRSRVDNED--RLIEGYANR---------P 356
            +   +   + R++               ++  R++ +D  R ++ Y  R          
Sbjct: 268 SKADKLRMTMTRLKQGWQHYGLKQAQRFSQLHHRLERQDPKRRLQQYEQRFDELQLRLGA 327

Query: 357 SLTQPLTMLEPHQRLIDDSI--------------------QRLDIGLRRIVDDAQLTVEK 396
           +LT  L  +E  Q+ +   +                    QRL   ++  ++ A+ +++ 
Sbjct: 328 ALTGKLHQMERRQQSLHARLNQVSPSHQLALAASRLTHQNQRLHSAMQARLNSAEKSLQY 387

Query: 397 AHASLTALSPQSTLNRGYAVVQSADGTVLDDASTAHIGDDITVTLKKGVITAT 449
           A   L  +SP +TL+RGY++    +G VL  A     G  +T  L  G + +T
Sbjct: 388 AAHQLETVSPLATLSRGYSITLDTEGKVLHSAQDVRTGARLTTKLVDGEVQST 440