Pairwise Alignments

Query, 802 a.a., anaerobic ribonucleoside-triphosphate reductase from Bifidobacterium breve UCC2003

Subject, 689 a.a., anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 73.9 bits (180), Expect = 3e-17
 Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 15/253 (5%)

Query: 28  KRDGRVVDFDPINIISAIKSAFGDLNKEVGPEEDAMIRGFADQVEGEIKERYAGPAKIED 87
           KRDGRV  +    +  AI  A     K  G ++  + +  A +VE ++++  A   + E 
Sbjct: 7   KRDGRVETWSVDRVAHAINKAL----KASGIKDPLLGKRLASRVEAKLEDVDA--PEQEH 60

Query: 88  IQNLVEHALIDAHLYDVARAYTNYRLDKDIQRAKAT---DVNEAVSRFINHDPTLIHENA 144
           +Q++V+  L++A LY VA  Y  YR  +   R +     D+   +  +++     ++EN+
Sbjct: 61  VQDMVQRVLMEARLYAVAERYIIYREKRREMRNQNQAYLDIARMIESYLDRSDWRVNENS 120

Query: 145 NKDSNVYSTQRDLLAGAVSKAAAFNMLPPAVSNAHMKGDIHFHDADYSPFTAQSNCSLPN 204
           N   + Y      +AG+V         P  V  AH  G  H HD     F     C+  +
Sbjct: 121 NMGHS-YQGLILHMAGSVQARYVLEKYPEEVRLAHTHGYFHIHDLS---FGLAGYCAGWS 176

Query: 205 FWDMLANGFTLGNAPMASPKS-IAIAATQITQIMKDVASSQYGGQTANRADEHLARYAKK 263
             D+L  GF L     A+P +    A  QI   +  + +   G Q  N  D +LA + + 
Sbjct: 177 LRDLLLEGFNLKGRCCAAPANHFDAACGQIVNFLGTLQNEWAGAQAFNNVDTYLAPFVRH 236

Query: 264 DYEKFLEEARETI 276
           D   + +E ++T+
Sbjct: 237 DGLTY-DEVKQTM 248



 Score = 60.1 bits (144), Expect = 4e-13
 Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 41/311 (13%)

Query: 476 NLGVVTVNVPRIAIESHGDKARFWKLFDERMEVAHQALQFRIMRCKEATPVNAPTLFRFG 535
           ++GVVT+N+P++A  + G++  F  +  E  E+A  AL+++   C   T +    +F F 
Sbjct: 402 SIGVVTLNLPKLAYLAQGEED-FLDMVTEYAEMARDALEYKRKLC---TKLLEAGMFPFS 457

Query: 536 A-FGRLGANDNVDALFKNERATVSLGYIGLAETTAVFYGKNWIRDHGWDPEGKEFALSIV 594
             + + G N +            ++G IG  E      GK    + G         L ++
Sbjct: 458 RRYLKNGYNGHFS----------TIGLIGGHEACLNLLGKGIESEAG---------LRLM 498

Query: 595 KR----MNELCKQWSKSEGYHYSVYSTPAESLTDRFNRMDREKFGRIE-GVTDHDFYTNS 649
           KR    + +L  ++ +  G+ Y++ +TP E    R  ++DRE +  I     D  +YTNS
Sbjct: 499 KRTLNHLRDLTVRFQEETGHMYNLEATPGEGTCYRLAKVDRELYEDIAVSGGDVPYYTNS 558

Query: 650 FHYPVWLQPTPMEKLNYEKDFPYYASGGFINYCEY-PCLQDNPKALEAVWDYAYNIGIGY 708
              PV +       L ++ +     +GG + +        D       +        I Y
Sbjct: 559 TLLPVGITDDVFSALEHQNELQTLYNGGTVFHSFLGEAAPDEDSVRNYLMKAMSKTRIPY 618

Query: 709 LGTNTPIDHCFVCGFQGDFEPTEEGFKCPECGNSNPDKCNVTKRTCGYLGSPVQRPMVHG 768
           +        C   G+        E F CP+CG    D+  V  R  GY   PV R  + G
Sbjct: 619 ISVTPTFSICQNHGYLHG-----EHFNCPQCG----DEAEVYTRVVGYY-RPVNRWNL-G 667

Query: 769 RHEEIAHRVKH 779
           + +E   R ++
Sbjct: 668 KQQEYKERKEY 678